Job Description P17993 Confidence 99.86% Date Thu Jan 5 11:36:26 GMT 2012 Rank 48 Aligned Residues 175 % Identity 16% Template c3opnA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative hemolysin; PDBTitle: the crystal structure of a putative hemolysin from lactococcus lactis Resolution 2.05 Å

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		L	G	Y	I	A	E	R	A	G	G	L	F	G	K	K	V	L	D	V	G	C	G	G	G	I	L	A	E	S	M	A	R	E	G	.	A	T	V	T	G	L	D	M	G	F	E	P	L	Q	V	A	K	L	H	A	L	E	S	G	I	Q	V	D	Y	V	Q	E	T	V	E	E	H	A	A	K	H	A	G	Q	Y
Query Conservation																																				.
Alig confidence																																				.																																							.
Template Conservation																																																																											.
Template Sequence		E	K	A	L	K	E	F	H	L	E	I	N	G	K	T	C	L	D	I	G	S	S	T	G	G	F	T	D	V	X	L	Q	N	G	A	K	L	V	Y	A	L	D	V	G	T	N	Q	L	A	W	K	I	R	S	D	E	R	V	V	V	X	E	Q	F	N	F	R	N	A	V	L	A	D	.	F	E	Q	G	R	P
Template Known Secondary structure								T	T				T	T							T		T	T	S									T	T		S							S	S										T		T	T						S			G	G	G			G	G	G	.			S
Template Predicted Secondary structure																																																																											.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	V	T	C	M	E	M	L	E	H	V	P	D	P	Q	S	V	V	R	A	C	A	Q	L	V	K	P	G	G	D	V	F	F	S	T	L	N	R	N	G	K	S	W	L	M	A	V	V	G	A	E	Y	I	L	R	M	V	P	K	G	T	H	D	V	K	K	F	I	K	P	A	E	L	L	G	W	V	D	Q
Query Conservation
Alig confidence														.	.	.																							.	.	.	.	.	.	.																						.	.
Template Conservation														.	.	.																							.	.	.	.	.	.	.																						.	.
Template Sequence		S	F	T	S	I	D	V	S	F	I	S	L	.	.	.	D	L	I	L	P	P	L	Y	E	I	L	E	K	N	G	E	V	A	A	L	I	K	.	.	.	.	.	.	.	P	Q	F	E	A	G	R	E	Q	V	G	N	G	I	I	R	D	P	K	V	H	.	.	Q	X	T	I	E	K	V	L	K	T	A	T	Q
Template Known Secondary structure		S							S	S	S		G	.	.	.	G	G	T								S		T	T									.	.	.	.	.	.	.					S																	.	.
Template Predicted Secondary structure														.	.	.																							.	.	.	.	.	.	.																						.	.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.				.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.								.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.			.	180	.	.	.	.	.	.	.	.	.	190	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	L	K	E	R	H	I	T	G	L	H	Y	N	P	I	T	N	T	F	K	L	G	P	G	V	D	V	N	Y	M	L	H	T	Q	N	K
Query Conservation
Alig confidence											.	.	.						.	.	.	.	.
Template Conservation											.	.	.						.	.	.	.	.
Template Sequence		L	G	F	S	V	K	G	L	T	.	.	.	F	S	P	I	K	.	.	.	.	.	G	G	A	G	N	V	E	F	L	V	H	L	L	K	D
Template Known Secondary structure			T								.	.	.			S	S		.	.	.	.	.	B	T	T	T	B										S
Template Predicted Secondary structure											.	.	.						.	.	.	.	.
Template SS confidence
		193	.	.	.	.	.	.	200	.				.	.	.	.	.						.	.	.	210	.	.	.	.	.	.	.	.	.	220	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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