Job Description P17993 Confidence 99.90% Date Thu Jan 5 11:36:26 GMT 2012 Rank 21 Aligned Residues 183 % Identity 13% Template c3ndjA_ PDB info PDB header:transferase Chain: A: PDB Molecule:methyltransferase; PDBTitle: x-ray structure of a c-3'-methyltransferase in complex with s-2 adenosyl-l-homocysteine and sugar product Resolution 1.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	S	R	W	W	D	L	E	G	E	F	K	P	L	H	R	I	N	P	L	R	L	G	Y	I	A	E	R	A	G	G	L	F	G	K	K	V	L	D	V	G	C	G	G	G	I	L	A	E	S	M	A	R	E	G	A	T	V	T	G	L	D	M	G	F	E	P	L	Q	V	A	K	L	H	A	L	E	S	G
Query Conservation
Alig confidence																																																																												.	.
Template Conservation																																																																												.	.
Template Sequence		F	H	E	V	Y	P	Y	H	S	S	G	S	S	V	M	R	E	H	F	A	M	L	A	R	D	F	L	A	T	E	L	T	G	P	D	P	F	I	V	E	I	G	C	N	D	G	I	M	L	R	T	I	Q	E	A	G	V	R	H	L	G	F	E	P	S	S	G	V	A	A	K	A	R	E	.	.	K	G	I	R
Template Known Secondary structure		S	S	T	T					G	G	G																		T	T	T		S	S	S							S		T	T	T	T	T							T	T								S										T	.	.	T	T
Template Predicted Secondary structure																																																																												.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.			.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Q	V	D	Y	V	Q	E	T	V	E	E	H	A	A	K	H	A	G	Q	Y	D	V	V	T	C	M	E	M	L	E	H	V	P	D	P	Q	S	V	V	R	A	C	A	Q	L	V	K	P	G	G	D	V	F	F	S	T	L	N	R	N	G	K	S	W	L	M	A	V	V	G	A	E	Y	I	L	R	M	V	P
Query Conservation
Alig confidence																																																													.	.														.	.	.	.	.	.
Template Conservation																																																													.	.														.	.	.	.	.	.
Template Sequence		V	R	T	D	F	F	E	K	A	T	A	D	D	V	R	R	T	E	G	P	A	N	V	I	Y	A	A	N	T	L	C	H	I	P	Y	V	Q	S	V	L	E	G	V	D	A	L	L	A	P	D	G	V	F	V	F	E	D	P	Y	.	.	L	G	D	I	V	A	K	T	S	F	D	Q	I	.	.	.	.	.	.
Template Known Secondary structure					S			S																					S		G	G	G		S																										.	.								T		G	G	G		.	.	.	.	.	.
Template Predicted Secondary structure																																																													.	.														.	.	.	.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.			.	210	.	.	.	.	.	.	.	.	.	220	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	T	H	D	V	K	K	F	I	K	P	A	E	L	L	G	W	V	D	Q	T	S	L	K	E	R	H	I	T	G	L	H	Y	N
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	Y	D	E	H	F	F	L	F	S	A	T	S	V	Q	G	M	A	Q	R	C	G	F	E	L	V	D	V	Q	R	L	P	V	H
Template Known Secondary structure		.	.	S	T	T																T	T	T											G	G
Template Predicted Secondary structure		.	.
Template SS confidence
				222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions