Job Description P17993 Confidence 87.25% Date Thu Jan 5 11:36:26 GMT 2012 Rank 374 Aligned Residues 177 % Identity 8% Template c3ieiD_ PDB info PDB header:transferase Chain: D: PDB Molecule:leucine carboxyl methyltransferase 1; PDBTitle: crystal structure of human leucine carboxylmethyltransferase-1 in2 complex with s-adenosyl homocysteine Resolution 1.90 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																												.																			.																										.	.	.	.	.	.	.	.	.
Query SS confidence																												.																			.																										.	.	.	.	.	.	.	.	.
Query Sequence		F	K	P	L	H	R	I	N	P	L	R	L	G	Y	I	A	E	R	A	G	G	L	F	G	K	K	.	V	L	D	V	G	C	G	G	G	I	L	A	E	S	M	A	R	E	.	G	A	T	V	T	G	L	D	M	G	F	E	P	L	Q	V	A	K	L	H	A	L	E	S	G	.	.	.	.	.	.	.	.	.
Query Conservation																												.																			.																										.	.	.	.	.	.	.	.	.
Alig confidence																												.																			.																										.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	R	G	Y	F	A	R	V	H	G	V	S	Q	L	I	K	A	F	L	R	K	T	E	C	H	C	Q	I	V	N	L	G	A	G	M	D	T	T	F	W	R	L	K	D	E	D	L	L	S	S	K	Y	F	E	V	D	F	P	M	I	V	T	R	K	L	H	S	I	K	C	K	P	P	L	S	S	P	I	L	E
Template Known Secondary structure																							T	T	T		S						T		T	T										T	T				S
Template Predicted Secondary structure
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
																													103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	Q	V	D	Y	V	Q	E	T	V	E	E	H	A	A	K	H	A	G	Q	Y	D	V	V	T	C	M	E	M	L	E	H	V	P	D	P	Q	S	V	V	R	A	C	A	Q	L	V	K	P	G	G	D	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	H	S	E	D	T	L	Q	M	D	G	H	I	L	D	S	K	R	Y	A	V	I	G	A	D	L	R	D	L	S	E	L	E	E	K	L	K	K	C	N	M	N	T	Q	L	P	T	L	L	I	A	E	C	V	L	V	Y	M	T	P	E	Q	S	A	N	L	L	K	W	A	A	N	S	F	E	R	A	M	F	I
Template Known Secondary structure		T	S	S	S	S	S		B			T	T					S	S								T	T												T	T			T	T	S								S		G	G	G	S																	S	S
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	F	S	T	L	N	R	N	G	K	S	W	L	M	A	V	V	G	A	E	Y	I	L	R	M	V	P	K	G	T	H	D	V	K	K	F	I	K	P	A	E	L	L	G	W	V	D	Q	T	S	L	K	E	R	H	I	T	G	L
Query Conservation
Alig confidence																														.	.	.	.
Template Conservation																														.	.	.	.
Template Sequence		N	Y	E	Q	V	N	M	G	D	R	F	G	Q	I	M	I	E	N	L	R	R	R	Q	C	D	L	A	G	.	.	.	.	V	E	T	C	K	S	L	E	S	Q	K	E	R	L	L	S	N	G	W	E	T	A	S	A	V	D	M
Template Known Secondary structure							S	T	T	S													T	T				T	T	.	.	.	.	G	G	G	G	S											T	T	T		S
Template Predicted Secondary structure																														.	.	.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.					.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions