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Job DescriptionP17993
Confidence99.73%DateThu Jan 5 11:36:26 GMT 2012
Rank100Aligned Residues123
% Identity11%Templatec3gnlB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:uncharacterized protein, duf633, lmof2365_1472; PDBTitle: structure of uncharacterized protein (lmof2365_1472) from2 listeria monocytogenes serotype 4b
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   43......50.........60.........70........ .80.........90.........100..... ....110.........
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Query Sequence  LRLGYIAERAGGLFGKKVLDVGCGGGILAESMAREG. . ATVTGLDMGFEPLQVAKLHALESGIQV. DYVQETVEEHAAKH
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Template Sequence  KRLEKVASYIT. . KNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEK
Template Known Secondary structure  TT

..SST
STTTTSSSTTT
TTT
SGGGG

G
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   14.....20.... .....30.........40.........50.........60.........70.........80.........90.
 
   120.........130.........140.........150.........160.........
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Query Sequence  AGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTLNRNGKSWLM
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Template Sequence  KDAIDTIVIAGXGGT. . LIRTILEEGAAKLAGVTKLILQPNIAAWQLREW
Template Known Secondary structure  GG



..TGGGGTT

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   92.......100...... ...110.........120.........130.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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