Return to main results Retrieve Phyre Job Id

Job DescriptionP17993
Confidence91.87%DateThu Jan 5 11:36:26 GMT 2012
Rank347Aligned Residues89
% Identity19%Templatec3c24A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:putative oxidoreductase; PDBTitle: crystal structure of a putative oxidoreductase (yp_511008.1) from2 jannaschia sp. ccs1 at 1.62 a resolution
Resolution1.62 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   53......60....... .. 70.........80.........90.........100.........110.........120.........
Predicted Secondary structure 









...


























Query SS confidence 














. .

.



























































Query Sequence  GGLFGKKVLDVGCGG. . GI. LAESMAREGATVTGLDMGFEPLQVAKLHALESGIQVDYVQETVEEHAAKHAGQYDVVTCM
Query Conservation      
  






 ..
 .    

     
 
 
 
                                    
 
   
Alig confidence 














..

.


























............




















Template Conservation       


 


 
 
 
      
   
  
               ............ 
    
  
    






Template Sequence  NDVGPKTVAILGAGGKXGARITRKIHDSAHHLAAIEIAPEGRDRLQG. . . . . . . . . . . . XGIPLTDGDGWIDEADVVVLA
Template Known Secondary structure 
S



TTTSSSS

S............TT




SSGGGGT
S
Template Predicted Secondary structure 













............






Template SS confidence 















































































   6...10.........20.........30.........40.........50.. .......60.........70...
 
   130.........140.........150......
Predicted Secondary structure 








Query SS confidence 


























Query Sequence  EMLEHVPDPQSVVRACAQLVKPGGDVF
Query Conservation         
    
  
   




   
Alig confidence 
...






















Template Conservation 
... 
     
   
   
  
  

Template Sequence  L. . . PDNIIEKVAEDIVPRVRPGTIVL
Template Known Secondary structure  S...
GGGS
TT
Template Predicted Secondary structure 
...





Template SS confidence 


























   74 .....80.........90.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions