Job Description P17993 Confidence 97.24% Date Thu Jan 5 11:36:26 GMT 2012 Rank 303 Aligned Residues 194 % Identity 16% Template c3b5iB_ PDB info PDB header:transferase Chain: B: PDB Molecule:s-adenosyl-l-methionine:salicylic acid carboxyl PDBTitle: crystal structure of indole-3-acetic acid methyltransferase Resolution 2.75 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.																		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	P	L	H	R	I	N	P	L	R	L	G	Y	I	A	E	R	A	G	G	L	F	G	K	K	V	L	D	V	G	C	G	G	G	I	L	A	E	S	M	A	R	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	V	T	G	L	D	M	G	F	E	P	L	Q	V	A	K	L	H
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	M	L	H	L	L	E	E	T	L	E	N	V	H	L	N	S	S	A	S	P	P	P	F	T	A	V	D	L	G	C	S	S	G	A	N	T	V	H	I	I	D	F	I	V	K	H	I	S	K	R	F	D	A	A	G	I	D	P	P	E	F	T	A	F	F	S	D	L	P	S	N	D	F	N	T	L	F	Q	L
Template Known Secondary structure													T	S					S	S	S										T			S	S	S																				T	T														T	T	S
Template Predicted Secondary structure
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		98	.	100							.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	E	.	.	.	.	.	.	S	G	I	Q	V	D	Y	V	Q	E	T	V	E	E	H	A	A	K	H	A	G	Q	Y	D	V	V	T	C	M	E	M	L	E	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation					.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	P	P	L	V	S	N	D	G	N	R	S	Y	F	V	A	G	V	P	G	S	F	Y	R	R	L	F	P	A	R	T	I	D	F	F	H	S	A	F	S	L	H	W	L	S	Q	V	P	E	S	V	T	D	R	R	S	A	A	Y	N	R	G	R	V	F	I	H	G	A	G	E	K	T	T	T	A	Y	K	R	Q
Template Known Secondary structure		S			B							B		S							S		T	T	S			S		T	T									S		T	T	B		S	S			G	G	G	G		T	T	S	T	T			T	T	T	S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
			135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.									.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.										.	.	190	.	.	.	.	.	.
Predicted Secondary structure		.																															.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.
Query SS confidence		.																															.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.
Query Sequence		.	V	P	D	P	Q	S	V	V	R	A	C	A	Q	L	V	K	P	G	G	D	V	F	F	S	T	L	N	R	N	G	.	.	.	.	.	.	.	.	K	S	W	L	M	A	V	V	G	A	E	Y	I	L	R	M	V	P	K	G	T	H	D	.	.	.	.	.	.	.	.	.	V	K	K	F	I	K	P	A	E
Query Conservation		.																															.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.
Alig confidence		.																															.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	Q	A	D	L	A	E	F	L	R	A	R	A	A	E	V	K	R	G	G	A	M	F	L	V	C	L	G	R	T	S	V	D	P	T	D	Q	G	G	A	G	L	L	F	G	T	H	F	Q	D	A	W	D	D	L	V	R	E	G	L	V	A	A	E	K	R	D	G	F	N	I	P	V	Y	A	P	S	L	Q	D
Template Known Secondary structure																																	S	S	T	T										S	S							T	T	T	T	S	S	S	S	S						S	S					B
Template Predicted Secondary structure
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	G	W	V	D	Q	T	S	L	K	E	R	H	I	T	G	L	H	Y	N	P	I	T	N	T	F	K	L	G	P	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	K	E	V	V	D	A	N	G	S	F	A	I	D	K	L	V	V	Y	K	G	G	S	P	L	V	V	N	E	P	D	D
Template Known Secondary structure											S																		S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions