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Job Description | P17993 | Confidence | 98.96% | Date | Thu Jan 5 11:36:26 GMT 2012 |
Rank | 242 | Aligned Residues | 114 |
% Identity | 12% | Template | c3adnB_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:spermidine synthase; |
PDBTitle: crystal structure of spermidine synthase from e. coli.
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Resolution | 2.90 Å |
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56 | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
F | G | K | K | V | L | D | V | G | C | G | G | G | I | L | A | E | S | M | A | R | E | . |
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G | A | T | V | T | G | L | D | M | G | F | E | P | L | Q | V | A | K | L | H | A | L | E | S | G | I | Q | V | D | Y | V | Q | E | T | V | E | E | H | A | A | K | H | A | G | Q | Y | D | V | V | T | C | M | E | M | L | E |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
H | A | K | H | V | L | I | I | G | G | G | D | G | A | M | L | R | E | V | T | R | H | K | N | V | E | S | I | T | M | V | E | I | D | A | G | V | V | S | F | C | R | Q | Y | L | P | N | H | N | A | G | S | Y | D | D | P | R | F | K | L | V | I | V | N | Q | T | S | Q | T | F | D | V | I | I | S | D | C | T | S | A |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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77 | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . |
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134 | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
H | V | P | D | P | Q | S | V | V | R | A | C | A | Q | L | V | K | P | G | G | D | V | F | F | S | T | L | N | R | N | G | K | S | W | L | M | A | V | V | G | A | E | Y |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
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F | Y | E | G | C | K | R | C | L | N | P | G | G | I | F | V | A | Q | N | G | V | C | F | L | Q | Q | E | E | A | I | D | S | H | R | K | L |
Template Known Secondary structure |   |
. | . | . | . | . | . | . |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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174 | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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