Return to main results Retrieve Phyre Job Id

Job DescriptionP17993
Confidence99.36%DateThu Jan 5 11:36:26 GMT 2012
Rank189Aligned Residues159
% Identity11%Templatec3a26A_
PDB info PDB header:transferaseChain: A: PDB Molecule:uncharacterized protein ph0793; PDBTitle: crystal structure of p. horikoshii tyw2 in complex with2 mesado
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   41........50.........60.........70........ .80.........90.........100.........110.........
Predicted Secondary structure 












.





















Query SS confidence 





































.








































Query Sequence  NPLRLGYIAERAGGLFGKKVLDVGCGGGILAESMAREG. ATVTGLDMGFEPLQVAKLHALESGIQVDYVQETVEEHAAKH
Query Conservation         
        
  






 
     

   .  
 
 
 
                                
Alig confidence 





































.








































Template Conservation       
          
  


   
 
   
  
      
  

    
      
   
     
     
      
Template Sequence  PANVKERVRMAKVAKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG
Template Known Secondary structure  GGGTTT

TT
TT
TTTTTT


S
TT
TTT
S
GGG


Template Predicted Secondary structure 




























Template SS confidence 















































































   110.........120.........130.........140.........150.........160.........170.........180.........
 
   120.........130.........140.........150.........160.........170.........180.........190.........
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  AGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTLNRNGKSWLMAVVGAEYILRMVPKGTHDVKKFIKPAELLG
Query Conservation      
 
          
    
  
   




   
   
                                   
  
Alig confidence 







....




























.......................















Template Conservation      
 

....
  
      
  
   




 
 
   .......................           
    
Template Sequence  ENIADRIL. . . . MGYVVRTHEFIPKALSIAKDGAIIHYHNT. . . . . . . . . . . . . . . . . . . . . . . VPEKLMPREPFETFKR
Template Known Secondary structure 
S
....


SSGGGG
.......................
BGGGTTTTT
Template Predicted Secondary structure 


....













.......................




Template SS confidence 















































































   190....... ..200.........210.........220...... ...230.........240..
 
   200.........210.... .....220......
Predicted Secondary structure 


...







Query SS confidence 














. . .











Query Sequence  WVDQTSLKERHITGL. . . HYNPITNTFKLG
Query Conservation   
  


        ... 
      
   
Alig confidence 














...











Template Conservation       
  


     

 
 
   

  
Template Sequence  ITKEYGYDVEKLNELKIKRYAPGVWHVVLD
Template Known Secondary structure  TTT

S
BTTTB

Template Predicted Secondary structure 







Template SS confidence 





























   243......250.........260.........270..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions