Return to main results Retrieve Phyre Job Id

Job DescriptionP17993
Confidence99.10%DateThu Jan 5 11:36:26 GMT 2012
Rank233Aligned Residues113
% Identity19%Templatec1sqgA_
PDB info PDB header:transferaseChain: A: PDB Molecule:sun protein; PDBTitle: the crystal structure of the e. coli fmu apoenzyme at 1.652 a resolution
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   47..50.........60.........70......... 80.........90.........100.........110....... ..120...
Predicted Secondary structure 













..


















.




Query SS confidence 
































. .





































.





Query Sequence  YIAERAGGLFGKKVLDVGCGGGILAESMAREGA. . TVTGLDMGFEPLQVAKLHALESGIQVDYVQETVEEHAA. KHAGQY
Query Conservation   
        
  






 
     

    .. 
 
 
 
                              .      
Alig confidence 
































..





































.





Template Conservation 
 
  
    
  


 


 
 

  

       
 
 
    

  
     
 
        
             
Template Sequence  GCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQF
Template Known Secondary structure  T


TT
S
TT

TT
SSTTTTT




TT
TTT

Template Predicted Secondary structure 




































Template SS confidence 















































































   237..240.........250.........260.........270.........280.........290.........300.........310......
 
   124.... .130........ .140.........150.........
Predicted Secondary structure  ......



................




Query SS confidence 




. . . . . .









. . . . . . . . . . . . . . . .




















Query Sequence  DVVTC. . . . . . MEMLEHVPDP. . . . . . . . . . . . . . . . QSVVRACAQLVKPGGDVFFST
Query Conservation 
 
  ......        
 ................   
  
   




   
  
Alig confidence 




......









................




















Template Conservation 
 

 
 



 
     
          
  
   
  

  
   




 




Template Sequence  DRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYAT
Template Known Secondary structure 




GGGTTT
TT

TTGGG
Template Predicted Secondary structure 






















Template SS confidence 

























































   317..320.........330.........340.........350.........360.........370....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions