|   |
21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | |
|
. | . | . | 40 | . | . | |
. | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
| . | . |  |  |  |  |  |  | . |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | P | D | F | T | P | R | V | A | F | I | L | G | S | G | L | . |
. |
G | A | L | A | D | Q | . |
I | E | N | A | V | A | I | S | Y | E | K | L | P | G | F | P | V | S | T | V | H | G | H | A | G | E | L | V | L | G | H | L | Q | G | V | P | V | V | C | M | K | G | R | G | H | F | Y | E | G | R | G | M | T | I | M |
Query Conservation |   |
  |   |   |   |   |
|   |
|
|
|
|   |
|
|
|
| . | . |   |   |
|   |   |   | . |   |   |   |   |   |   |
|   |
|   |   |
|
|   |
|
|   |   |
|   |   |
|
|   |
|   |
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |
|
|   |
|   |
|
|
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|   |   |
|
|   |   |
|
|
|   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |
|   |   | . | . | . | . | . | . |   |
|
|
|   |   |   |
|
Template Sequence |   |
H | P | G | D | V | A | E | R | V | L | L | P | G | D | P | G | R | A | E | W | I | A | K | T | F | L | Q | N | P | R | R | Y | N | D | H | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | L | W | G | Y | T | G | L | Y | K | G | V | P | V | S | V | Q | T | . |
. |
. |
. |
. |
. |
T | G | M | G | T | P | S | A |
Template Known Secondary structure |   |
| G | G | G | S |
| S |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |
| G | G | . | . | . | . | . | . | . | . | . | . | . | . | G |
|
|  |  |  |  |  |  | T | T |  |  |  |  |  |  |
| . | . | . | . | . | . |
|
| S | S |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  | . | . | . | . | . | . |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | |
|
|
|
|
|
. | . | . | . | . | . | . | 70 |
  |
  |   |
98 | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | D | A | I | R | T | F | K | L | L | G | C | E | L | L | F | C | T | N | A | A | G | S | L | R | P | E | V | G | A | G | S | L | V | A | L | K | D | H | I | N | T | M | P | G | T | P | M | V | G | L | N | D | D | R | F | G | E | R | F | F | S | L | A | N | A | Y | D | A | E | Y | R | A | L | L | Q | K | V | A | K |
Query Conservation |   |
  |   |   |
|   |   |
|   |   |
|
|
|   |   |
|
|   |
|   |
|
|
|   |
|   |   |   |   |   |   |
|
|
|
|
|   |   |
|   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |
|   |
|
|
|
|   |   |   |   |   |   |
|
|
|
|
|   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . |
|   |   |
|   |   |   |
|   |   |   |   |   |
Template Sequence |   |
A | I | V | V | E | E | L | V | R | L | G | A | R | V | L | V | R | V | G | T | A | G | A | A | S | S | D | L | A | P | G | E | L | I | V | A | Q | G | A | V | P | L | D | G | T | T | R | Q | Y | L | E | G | R | P | Y | A | P | V | P | . |
. |
. |
. |
. |
. |
. |
. |
D | P | E | V | F | R | A | L | W | R | R | A | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  | S | S | T | T | S |
| T | T |
|  |  |  |  |  |  |  |  |  |  | S |  |  |  |  |  |  |  | T | T |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
71 | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
130 | . | . | . | . | . | . | . | . | . | 140 | . | . |
  |
  |   |
178 | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | E | G | F | P | L | T | E | G | V | F | V | S | Y | P | G | P | N | F | E | T | A | A | E | I | R | M | M | Q | I | I | G | G | D | V | V | G | M | S | V | V | P | E | V | I | S | A | R | H | C | D | L | K | V | V | A | V | S | A | I | T | N | M | A | E | G | L | S | D | V | K | L | S | H | A | Q | T | L | A | A |
Query Conservation |   |
  |   |
|   |   |   |   |   |
|
|
|   |   |   |   |
|
|   |
|
|
|   |
|
|   |
|   |   |
|   |   |
|
|
|   |
|
|
|
|   |
|
|
|
|   |   |
|
|   |   |
|
|   |   |   |   |
|
|   |
|
|
|   |
|   |
|   |   |   |   |   |   |
|   |
|
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|
|   |   |   |
|   |   |   |
|
|   |   |   |   |
|   |   |
|
|
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |
|   |
Template Sequence |   |
A | L | G | Y | P | H | R | V | G | L | V | A | S | E | D | A | F | Y | A | T | T | P | E | E | A | R | A | W | A | R | Y | G | V | L | A | F | E | M | E | A | S | A | L | F | L | L | G | R | M | R | G | V | R | T | G | A | I | L | A | V | S | N | R | I | P | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | V |
Template Known Secondary structure |   |
 | T | T |
|
|  |  |  |  |  |  |  |  |  | S |
| T | T | T |
|
|  |  |  |  |  |  |  |  | T | T | T |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |  |  |  |  |  |  |
|
|  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
143 | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | 210 |
  |
  |   |
258 | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | E | L | S | K | Q | N | F | I | N | L | I | C | G | F | L | R | K | I |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |   |
|
Template Sequence |   |
L | Q | E | G | V | R | R | M | V | E | V | A | L | E | A | V | L | E | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
217 | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . |
  |