|   |
68 | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | L | V | L | G | H | L | Q | G | V | P | V | V | C | M | K | G | R | G | H | F | Y | E | G | R | G | M | T | I | M | T | D | A | I | R | T | F | K | L | L | G | C | E | L | L | F | C | T | N | A | A | G | S | L | R | P | E | V | G | A | G | S | L | V | A | L | K | D | H | I | N | T | M | P | G | T | P | M | V | G |
Query Conservation |   |
  |
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |
|
|   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|
|   |   |
|
|   |
|   |
|
|
|   |
|   |   |   |   |   |   |
|
|
|
|
|   |   |
|   |
|   |   |   |   |   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |   |
|   |   |
|   |
|   |   |   |
|
| . | . | . | . |
|   |   |   |
|
|
|   |   | . |   |
|
|
|   |   |   |   |   |   |   |
|
|   |   |
|
|   |
|
|
|   |   |   |   |   |   |
|
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
Template Sequence |   |
L | G | F | T | G | T | Y | K | G | R | K | I | S | V | M | G | H | G | M | . |
. |
. |
. |
G | I | P | S | C | S | I | Y | T | . |
K | E | L | I | T | D | F | G | V | K | K | I | I | R | V | G | S | C | G | A | V | L | P | H | V | K | L | R | D | V | V | I | G | M | G | A | C | T | D | S | K | V | N | R | I | R | F |
Template Known Secondary structure |   |
|  |  |  |  |  |  | T | T |  |  |  |  |  |  |
|
|
| S | . | . | . | . | S |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
| S | T | T |
|
| T | T |
|  |  |  |  |  |  |  |  |  | S |
| S |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
| . | . | . | . |
|  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
46 | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | |
|
|
|
. | . | . | . | . | 70 | . | . | . | |
. | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 |
  |
  |   |
148 | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | N | D | D | R | F | G | E | R | F | F | S | L | A | N | A | Y | D | A | E | Y | R | A | L | L | Q | K | V | A | K | E | E | G | F | P | L | T | E | G | V | F | V | S | Y | P | G | P | N | F | E | T | A | A | E | I | R | M | M | Q | I | I | G | G | D | V | V | G | M | S | V | V | P | E | V | I | S | A | R | H | C |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|
|
|   |   |   |   |
|
|   |
|
|
|   |
|
|   |
|   |   |
|   |   |
|
|
|   |
|
|
|
|   |
|
|
|
|   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |   | . | . | . | . | . | . | . | . |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|   |   |   |
|   |   |   |
Template Sequence |   |
K | D | H | D | F | A | A | I | A | . |
. |
. |
. |
. |
. |
. |
. |
D | F | D | M | V | R | N | A | V | D | A | A | K | A | L | G | I | D | A | R | V | G | N | L | F | S | A | D | L | F | Y | S | P | D | G | E | M | F | D | V | M | E | K | Y | G | I | L | G | V | E | M | E | A | A | G | I | Y | G | V | A | A | E | F |
Template Known Secondary structure |   |
T | T | S |
|
|
|  |  |
| . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |
| S |
| S | S |
| S |
| T |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
121 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . |
  |
  |   |
228 | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | L | K | V | V | A | V | S | A | I | T | N | M | A | E | G | L | S | D | V | K | L | S | H | A | Q | T | L | A | A | A | E | L | S | K | Q | N | F | I | N | L | I | C | G | F |
Query Conservation |   |
|
|   |   |   |   |
|
|   |
|
|
|   |
|   |
|   |   |   |   |   |   |
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |
|   |   |
|
|
|   |   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|   |   |
Template Sequence |   |
G | A | K | A | L | T | I | C | T | V | S | D | H | I | R | . |
. |
T | H | E | Q | T | T | A | A | E | R | Q | T | T | F | N | D | M | I | K | I | A | L | E | S | V | L | L | G |
Template Known Secondary structure |   |
T |
|  |  |  |  |  |  |  |  |  |  |  | T | T | . | . | T |
|
| B |
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
| . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
193 | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | |
|
. | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . |
  |