Job Description P45563 Confidence 99.96% Date Thu Jan 5 12:03:16 GMT 2012 Rank 18 Aligned Residues 226 % Identity 17% Template c3qpbB_ PDB info PDB header:transferase Chain: B: PDB Molecule:uridine phosphorylase; PDBTitle: crystal structure of streptococcus pyogenes uridine phosphorylase2 reveals a subclass of the np-i superfamily Resolution 1.82 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		K	P	D	F	T	P	R	V	A	F	I	L	G	S	G	.	.	L	G	A	L	A	D	Q	I	E	N	A	V	A	I	S	Y	E	K	L	P	G	F	P	V	S	T	V	H	G	H	A	G	E	L	V	L	G	H	L	Q	G	V	P	V	V	C	M	K	G	R	G	H	F	Y	E	G	R	G	M	T	I	M	T
Query Conservation																	.	.
Alig confidence																	.	.																			.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template Sequence		R	P	G	D	V	G	R	Y	V	I	M	P	G	D	P	K	R	C	A	K	I	A	E	H	F	D	N	A	V	L	V	A	D	S	R	.	.	.	.	.	.	.	.	.	.	.	.	E	Y	V	T	Y	T	G	T	L	N	G	E	K	V	S	V	T	S	T	.	.	.	.	.	.	G	I	G	G	P	S	A	S
Template Known Secondary structure			T	T	S	S		S						S		T	T							T	T	S										T	.	.	.	.	.	.	.	.	.	.	.	.	T									T	T									.	.	.	.	.	.		S	S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.													.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70							.	.	.	.	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	I	R	T	F	K	L	L	G	C	E	L	L	F	C	T	N	A	A	G	S	L	R	P	E	V	G	A	G	S	L	V	A	L	K	D	H	I	N	T	M	P	G	T	P	M	V	G	L	N	D	D	R	F	G	E	R	F	F	S	L	A	N	A	Y	D	A	E	Y	R	A	L	L	Q	K	V	A	K	E
Query Conservation
Alig confidence																																																				.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.
Template Sequence		I	A	M	E	E	L	K	L	C	G	A	D	T	F	I	R	V	G	T	C	G	G	I	E	L	D	V	K	G	G	D	I	V	I	A	T	G	A	I	R	M	E	G	T	S	K	E	Y	A	P	.	.	.	.	.	.	.	.	.	I	E	F	P	A	V	A	D	L	E	V	T	N	A	L	V	N	A	A	K	K
Template Known Secondary structure										T	T														S	T	T			T	T												S	S	S	G	G	G	T	S		.	.	.	.	.	.	.	.	.	T	T	S
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.										.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.												.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	G	F	P	L	T	E	G	V	F	V	S	Y	P	G	.	.	.	.	.	.	.	.	.	.	.	P	N	F	E	T	A	A	E	I	R	M	M	Q	I	I	G	G	D	V	V	G	M	S	V	V	P	E	V	I	S	A	R	H	C	D	L	K	V	V	A	V	S	A	I	T	N	M	A	E	G	L	S	D	V
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.																																																		.	.
Template Conservation																																																																													.	.
Template Sequence		L	G	Y	T	S	H	A	G	V	V	Q	C	K	D	A	F	Y	G	Q	H	E	P	E	R	M	P	V	S	Y	E	L	L	N	K	W	E	A	W	K	R	L	G	T	K	A	S	E	M	E	S	A	A	L	F	V	A	A	S	H	L	G	V	R	C	G	S	D	F	L	V	V	G	N	Q	E	.	.	R	N	A
Template Known Secondary structure			T												S								G	G	G	S	T	T													T	T	T						S	S												T															.	.
Template Predicted Secondary structure																																																																													.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.			.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	S	H	A	Q	T	L	A	A	A	E	L	S	K	Q	N	F	I	N	L	I	C	G	F	L	R	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	M	D	N	P	M	A	H	D	T	E	A	A	I	Q	V	A	V	E	A	L	R	T	L	I	E	N
Template Known Secondary structure		T	T									T
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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