Return to main results Retrieve Phyre Job Id

Job DescriptionP45563
Confidence27.38%DateThu Jan 5 12:03:16 GMT 2012
Rank73Aligned Residues93
% Identity13%Templatec3kl9F_
PDB info PDB header:hydrolaseChain: F: PDB Molecule:glutamyl aminopeptidase; PDBTitle: crystal structure of pepa from streptococcus pneumoniae
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   156...160.........170.........180.........190.........200.........210.........220.... .....230...
Predicted Secondary structure 





























..



Query SS confidence 




































































. .








Query Sequence  RFFSLANAYDAEYRALLQKVAKEEGFPLTEGVFVSYPGPNFETAAEIRMMQIIGGDVVGMSVVPEVISA. . RHCDLKVVA
Query Conservation          

  
       
   
     


    

 


 

 
  
  


 



 



  
..
  

    
Alig confidence 





























...........................











..








Template Conservation                  
       
     ...........................    




        




 
Template Sequence  RFYDPGHLLLPGMKDFLLTTAEEAGIKYQY. . . . . . . . . . . . . . . . . . . . . . . . . . . YCGKGGTDAGAAHLKNGGVPSTT
Template Known Secondary structure  TT

TT

...........................
SS

TTTSTT


Template Predicted Secondary structure 











...........................








Template SS confidence 















































































   257..260.........270.........280...... ...290.........300.........
 
   234.....240.........250.........260.........270......
Predicted Secondary structure 











Query SS confidence 










































Query Sequence  VSAITNMAEGLSDVKLSHAQTLAAAELSKQNFINLICGFLRKI
Query Conservation 

 


 
 
      
 


 
           

   
  
Alig confidence 









.































Template Conservation   
      

.  
 
 
  
          
  
        
Template Sequence  IGVCARYIHS. HQTLYAMDDFLEAQAFLQALVKKLDRSTVDLI
Template Known Secondary structure  BT
SS.S

S
Template Predicted Secondary structure 








.


Template SS confidence 










































   310......... 320.........330.........340.........350.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions