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Job DescriptionP45563
Confidence100.00%DateThu Jan 5 12:03:16 GMT 2012
Rank9Aligned Residues262
% Identity36%Templatec3khsB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:purine nucleoside phosphorylase; PDBTitle: crystal structure of grouper iridovirus purine nucleoside2 phosphorylase
Resolution2.38 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  QVQFSHNPLFCIDIIKTYKPDFTPRVAFILGSGLGALADQIENAVAISYEKLPGFPVSTVHGHAGELVLGHLQGVPVVCM
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Template Sequence  MTDYDL. AKETAAWLNK. QLQIRPVLGIVCGSGLGKIGDSLETSITVAYSDIPNFP. . . . . VGAGSLIFGSVNGVSCVCM
Template Known Secondary structure 

.T.T
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S
TT
GGGGGG
GGGSTT

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TT
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   1..... ...10...... ...20.........30.........40.........50.... .....60.........70...
 
   83......90.........100.........110.........120.........130.........140 .........150.........
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Query Sequence  KGRGHFYEGRGMTIMTDAIRTFKLLGCELLFCTNAAGSLRPEVGAGSLVALKDHINTM. . . PGTPMVGLNDDRFGERFFS
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Template Sequence  KGRFHLYEGHTAARATFPMRVFKALGVKIVVLTNAAGGLNPSYRPGDFMVVRDHINLPGLAGANPLTGPNDDTEGERFPS
Template Known Secondary structure  S


GGGT

TTT


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   7980.........90.........100.........110.........120.........130.........140.........150........
 
   160.........170.........180.. .......190.........200.........210.........220.........230.......
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Query Sequence  LANAYDAEYRALLQKVAKEEGFP. . LTEGVFVSYPGPNFETAAEIRMMQIIGGDVVGMSVVPEVISARHCDLKVVAVSAI
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Template Sequence  MTSVYDKTLRKYAISAARELGMSYATHEGVYCCVNGPSFETPAECKILRLMGSDAVGMSTAPETIVAKHGGMRCLAVSLI
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TT
B
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   159160.........170.........180.........190.........200.........210.........220.........230........
 
   238.240.........250.........260.........270.......
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Query Sequence  TNMAEGLSDVKLSHAQTLAAAELSKQNFINLICGFLRKIA
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Template Sequence  SNVIAS. . . . . . NCEEVLRAGEEASARMTALVKLVIEKIR
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T......T


T
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   239240.... .....250.........260.........270..
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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