Job Description P45563 Confidence 99.91% Date Thu Jan 5 12:03:16 GMT 2012 Rank 34 Aligned Residues 225 % Identity 14% Template c3dp9A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:mta/sah nucleosidase; PDBTitle: crystal structure of vibrio cholerae 5'-methylthioadenosine/s-adenosyl2 homocysteine nucleosidase (mtan) complexed with butylthio-dadme-3 immucillin a Resolution 2.30 Å

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		27	.	.	30	.	.	.	.	.	.			.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		R	V	A	F	I	L	G	S	G	L	.	.	G	A	L	A	D	Q	I	E	N	A	V	A	I	S	Y	E	K	L	P	G	F	P	V	S	T	V	H	G	H	A	G	E	L	V	L	G	H	L	Q	G	V	P	V	V	C	M	K	G	R	G	H	F	Y	E	G	R	G	M	T	I	M	T	D	A	I	R	T	F
Query Conservation												.	.
Alig confidence												.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.										.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.										.
Template Sequence		K	I	G	I	I	G	A	M	Q	Q	E	V	A	I	L	K	D	L	I	E	D	V	Q	E	V	N	Q	A	.	.	.	.	.	.	.	.	.	.	.	.	.	G	C	T	F	Y	S	G	Q	I	Q	G	V	D	V	V	L	L	Q	S	G	I	.	.	.	.	G	K	V	S	A	A	L	G	T	.	A	L	L	I
Template Known Secondary structure								S	S									T	T										T	.	.	.	.	.	.	.	.	.	.	.	.	.	T									T	T										S	.	.	.	.	S									.
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.										.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.														30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50					.	.	.	.	.	.	.	.	.		60	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		K	L	L	G	C	E	L	L	F	C	T	N	A	A	G	S	L	R	P	E	V	G	A	G	S	L	V	A	L	K	D	H	I	N	T	M	P	G	T	P	M	V	G	L	N	D	D	R	F	G	E	R	F	F	S	L	A	N	A	Y	D	A	E	Y	R	A	L	L	Q	K	V	A	K	E	E	.	G	F	P	L
Query Conservation																																																																													.
Alig confidence																																																		.	.																										.
Template Conservation																																																		.	.
Template Sequence		S	Q	Y	A	P	D	V	V	I	N	T	G	S	A	G	G	F	D	A	S	L	N	V	G	D	V	V	I	S	S	E	V	R	H	H	D	A	D	V	T	A	F	G	Y	E	I	G	Q	.	.	M	A	G	Q	P	A	A	F	K	A	D	E	K	L	M	T	V	A	E	Q	A	L	A	Q	L	P	N	T	H	A
Template Known Secondary structure							S												S	T	T			T	T											T	T				G	G	G	T			T	T		.	.		T	T	S		S	S																T	T	S	T	T
Template Predicted Secondary structure																																																		.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.			.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		T	E	G	V	F	V	S	Y	P	G	P	N	F	E	T	A	A	E	I	R	M	M	Q	I	I	.	G	G	D	V	V	G	M	S	V	V	P	E	V	I	S	A	R	H	C	D	L	K	V	V	A	V	S	A	I	T	N	M	A	E	G	L	S	D	V	K	L	S	H	A	Q	T	L	A	A	A	E	L	S	K
Query Conservation																											.
Alig confidence																											.																																					.	.	.	.	.
Template Conservation																																																																.	.	.	.	.
Template Sequence		V	R	G	L	I	C	T	G	D	A	F	V	C	T	A	E	R	Q	Q	F	I	R	Q	H	F	P	S	V	V	A	V	E	M	E	A	S	A	I	A	Q	T	C	H	Q	F	K	V	P	F	V	V	V	R	A	I	S	D	V	A	D	K	E	.	.	.	.	.	S	P	L	S	F	E	E	F	L	P	L	A	A
Template Known Secondary structure										S	S				S												T	T						S	S												T													S	S	T	T	.	.	.	.	.
Template Predicted Secondary structure																																																																.	.	.	.	.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.						.	.	.	.	.	.	210	.	.	.	.	.	.
		263	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	N	F	I	N	L	I	C	G	F	L	R	K	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	S	S	S	A	M	V	L	K	M	V	E	L	L
Template Known Secondary structure														T
Template Predicted Secondary structure
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions