Job Description P45563 Confidence 99.74% Date Thu Jan 5 12:03:16 GMT 2012 Rank 40 Aligned Residues 193 % Identity 14% Template c3bjeA_ PDB info PDB header:transferase Chain: A: PDB Molecule:nucleoside phosphorylase, putative; PDBTitle: crystal structure of trypanosoma brucei nucleoside phosphorylase shows2 uridine phosphorylase activity Resolution 1.44 Å

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		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.																													.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	G	H	L	Q	G	V	P	V	V	C	M	K	G	R	G	H	F	Y	E	G	R	G	M	T	I	M	T	D	A	I	R	T	F	K	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	C	E	L	L	F	C	T	N	A	A	G	S	L
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.			.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.			.	.	.
Template Sequence		A	T	G	T	Y	K	G	T	P	V	T	V	I	.	.	.	S	T	.	.	.	G	M	G	V	D	N	I	E	I	V	L	N	E	I	H	A	L	K	E	Y	D	M	E	R	G	Q	W	R	H	R	K	G	D	A	D	A	P	S	A	G	P	F	F	D	P	S	T	M	K	I	I	R	L	G	T	C	G	S	P
Template Known Secondary structure							T	T							.	.	.			.	.	.		S	S																			T	T	T	T				B		T	T		T	T	S		T	T			B			G	G	G
Template Predicted Secondary structure															.	.	.			.	.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.				.	.				.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.																	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Query Sequence		R	P	E	V	G	A	G	S	L	V	A	L	K	D	H	I	N	T	M	P	G	T	P	M	V	G	L	N	D	D	R	F	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	F	F	S	L	A	N	A	Y	D	A	E	Y	R	A	L	L	Q	K	V	A	K	E	E	.	.	.	.	.	.
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Template Conservation
Template Sequence		A	E	S	V	P	P	L	A	L	A	V	T	R	H	A	I	G	M	D	N	T	S	L	Y	Y	S	A	G	T	R	E	T	S	K	D	Q	Q	E	I	R	R	I	V	R	E	Q	T	G	L	R	A	I	D	I	Y	T	S	M	A	H	P	N	I	T	K	S	I	C	A	A	C	D	A	H	N	A	A	T	G	S
Template Known Secondary structure			T	T	S		T	T												S		G	G	G	G	G	T	T	T	T	S																	S	G	G	G	G	S																									T
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
					180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.														.	.	.	.	200	.	.	.	.	.	.	.	.	.										210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure		.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	G	F	P	L	T	E	G	V	F	V	S	Y	P	G	P	N	.	.	.	.	.	.	.	.	.	.	.	.	.	F	E	T	A	A	E	I	R	M	M	Q	I	I	G	.	.	.	.	.	.	.	.	.	G	D	V	V	G	M	S	V	V	P	E	V	I	S	A	R	H	C	D	L	K	V	V	A	V
Query Conservation		.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	A	D	K	Q	Q	Y	V	I	G	T	T	A	T	A	S	G	F	Y	G	C	Q	G	R	R	V	G	R	F	M	K	H	L	T	V	P	N	M	V	E	E	L	G	S	L	K	F	N	L	S	N	G	V	E	V	V	T	N	I	E	M	E	T	S	A	I	C	Y	L	S	D	M	L	G	Y	Q	A	G	A	A
Template Known Secondary structure		G	G	G													S	S	S	S	G	G	G	T				G	G	G	G	G	G		S	S	T	T													T	T										S	S												T
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	I	T	N	M	A	E	G	L	S	D	V	K	L	S	H	A	Q	T	L	A	A	A	E	L	S	K	Q	N	F	I	N	L	I	C	G	F	L
Query Conservation
Alig confidence											.															.	.	.	.
Template Conservation											.															.	.	.	.
Template Sequence		C	V	V	V	S	K	R	V	G	.	E	K	K	M	F	L	G	D	Q	L	D	A	A	M	.	.	.	.	K	R	C	I	K	I	I	L	E	A	L
Template Known Secondary structure								S	S	T	.	T						T								.	.	.	.
Template Predicted Secondary structure											.															.	.	.	.
Template SS confidence
		305	.	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.	.	.	.	.	.	.					.	.	330	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions