Return to main results Retrieve Phyre Job Id

Job DescriptionP45563
Confidence57.56%DateThu Jan 5 12:03:16 GMT 2012
Rank46Aligned Residues135
% Identity13%Templatec2greC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:deblocking aminopeptidase; PDBTitle: crystal structure of deblocking aminopeptidase from bacillus cereus
Resolution2.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   94.....100.........110.........120.........130.........140.........150.........160.........170...
Predicted Secondary structure 











































Query SS confidence 















































































Query Sequence  MTIMTDAIRTFKLLGCELLFCTNAAGSLRPEVGAGSLVALKDHINTMPGTPMVGLNDDRFGERFFSLANAYDAEYRALLQ
Query Conservation         
  
  


  

 
 


 
      




  
 
      
  
      
         

  
     
Alig confidence 


































....








































Template Conservation   
 

     
               
  



  ....

  
  
     
            
        
   
 
Template Sequence  VAILLKLIKRLQDENVTLPYTTHFLISNNENIPEE. . . . TVEYLAVDXGALGDGSDEYTVSICAKDSSGPYHYALRKHLV
Template Known Secondary structure  T


SS




TT....




S



TTSTT

Template Predicted Secondary structure 















....




















Template SS confidence 















































































   191........200.........210.........220..... ....230.........240.........250.........260......
 
   174.....180.........190.........200.........210.........220.........230.........240.........250...
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  KVAKEEGFPLTEGVFVSYPGPNFETAAEIRMMQIIGGDVVGMSVVPEVISARHCDLKVVAVSAITNMAEGLSDVKLSHAQ
Query Conservation    
   
     


    

 


 

 
  
  


 



 



  

  

    

 


 
 
      
 

Alig confidence 





















................................















.
.






Template Conservation    
    

 
         
 ................................

     
      

. .
 
   
Template Sequence  ELAKTNHIEYKVDIYPYYRAGF. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DVKHALIGAGIDSSHA. F. ERTHESS
Template Known Secondary structure  TT

TT


SS................................SS

SS
SS.S.
Template Predicted Secondary structure 











................................










.
.
Template SS confidence 















































































   277..280.........290........ .300.........310.... . ....320..
 
   254.....260.........270....
Predicted Secondary structure 
Query SS confidence 




















Query Sequence  TLAAAELSKQNFINLICGFLR
Query Conservation 
 
           

   
 
Alig confidence 





........






Template Conservation 
     ........

   
 
Template Sequence  IAHTEA. . . . . . . . LVYAYVX
Template Known Secondary structure  ........T
Template Predicted Secondary structure  ........
Template SS confidence 




















   331..... ...340...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions