Job Description P45563 Confidence 17.34% Date Thu Jan 5 12:03:16 GMT 2012 Rank 99 Aligned Residues 84 % Identity 19% Template c2gaaA_ PDB info PDB header:unknown function Chain: A: PDB Molecule:hypothetical 39.9 kda protein; PDBTitle: crystal structure of yfh7 from saccharomyces cerevisiae: a2 putative p-loop containing kinase with a circular3 permutation. Resolution 1.95 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.
Predicted Secondary structure																			.													.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.													.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	Q	F	S	H	N	P	L	F	C	I	D	I	I	K	T	Y	.	K	P	D	F	T	P	R	V	A	F	I	L	.	.	G	S	G	L	G	A	L	A	D	Q	I	E	N	A	V	A	I	S	Y	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																			.													.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.													.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	D	T	H	K	L	A	D	D	V	L	Q	L	L	D	N	R	I	E	D	N	Y	R	V	C	V	I	L	V	G	S	P	G	S	G	K	S	T	I	A	E	E	L	Q	I	I	N	E	K	Y	H	T	F	L	S	E	H	P	N	V	I	E	V	N	D	R	L	K	P	M	V	N	L	V	D	S	L	K	T	L
Template Known Secondary structure																			T	T	T		S										T	T	S																							S	T	T							T	T	S					S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
																					53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.													.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	L	P	G	F	P	V	S	T	V	H	G	H	A	G	E	L	V	L	G	H	L	Q	G	.	.	.	.	.	.	.	.	.	.	.	.	V	P	V	V	C	M	K	G	R	G	H	F	Y
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.									.	.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation																																				.																													.
Template Sequence		Q	P	N	K	V	A	E	M	I	E	N	Q	G	L	F	K	D	H	V	E	D	V	N	F	Q	P	V	K	Y	S	A	E	E	T	.	A	V	V	A	R	G	G	T	A	N	A	I	R	I	A	A	S	I	N	I	A	Q	I	V	P	M	D	G	.	F	H	L	S
Template Known Secondary structure												T	T	T			G	G	G	T	T		T	T												.					T	T	G	G	G	G										S						G	G	G	.	G	B
Template Predicted Secondary structure																																				.																													.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions