Job Description P45563 Confidence 100.00% Date Thu Jan 5 12:03:16 GMT 2012 Rank 12 Aligned Residues 244 % Identity 25% Template c1wtaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:5'-methylthioadenosine phosphorylase; PDBTitle: crystal structure of 5'-deoxy-5'-methylthioadenosine from aeropyrum2 pernix (r32 form) Resolution 1.78 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.				.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.			.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																			.	.	.																																															.	.
Query SS confidence																			.	.	.																																															.	.
Query Sequence		Y	K	P	D	F	T	P	R	V	A	F	I	L	G	S	G	L	.	.	.	G	A	L	A	D	Q	I	E	N	A	V	A	I	S	Y	E	K	L	P	G	F	P	V	S	T	V	H	G	H	A	G	E	L	V	L	G	H	L	Q	G	V	P	V	V	C	M	.	.	K	G	R	G	H	F	Y	E	G	R	G	M
Query Conservation																			.	.	.																																															.	.
Alig confidence																			.	.	.																						.	.	.	.	.	.	.	.	.	.	.															.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	P	P	G	V	R	A	H	V	G	V	I	G	G	S	G	L	Y	D	P	G	I	V	E	N	P	V	E	V	K	V	S	T	P	Y	G	N	P	S	D	F	.	.	.	.	.	.	.	.	.	.	.	I	V	V	G	D	V	A	G	V	K	V	A	F	L	P	R	H	G	R	G	H	R	I	P	P	H	A	I
Template Known Secondary structure			S	T	T				S							G	G	G			T	T	T												T	T				S	S		.	.	.	.	.	.	.	.	.	.	.							T	T								T	T	T	T	T	T		S		G	G	G
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.												.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	M	T	D	A	I	R	T	F	K	L	L	G	C	E	L	L	F	C	T	N	A	A	G	S	L	R	P	E	V	G	A	G	S	L	V	A	L	K	D	H	I	N	T	M	P	G	T	P	M	V	G	L	N	D	D	R	F	G	E	R	F	F	S	L	A	N	A	Y	D	A	E	Y	R	A	L	L	Q	K
Query Conservation
Alig confidence							.																																																					.
Template Conservation							.																																																					.
Template Sequence		N	Y	R	A	N	.	I	W	A	L	K	A	L	G	V	K	W	V	I	S	V	S	A	V	G	S	L	R	E	D	Y	R	P	G	D	F	V	V	P	D	Q	F	I	D	M	T	K	N	R	R	H	Y	T	F	Y	D	G	P	.	V	T	V	H	V	S	M	A	D	P	F	C	E	D	L	R	Q	R	L	I	D
Template Known Secondary structure							.								T													S	S	T	T	S		T	T																S		S		S			S	S	.	S		B					S	S		S
Template Predicted Secondary structure							.																																																					.
Template SS confidence
		75	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		175	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure													.																							.
Query SS confidence													.																							.
Query Sequence		V	A	K	E	E	G	F	P	L	T	E	.	G	V	F	V	S	Y	P	G	P	N	F	E	T	A	A	E	I	R	M	M	Q	I	.	I	G	G	D	V	V	G	M	S	V	V	P	E	V	I	S	A	R	H	C	D	L	K	V	V	A	V	S	A	I	T	N	M	A	E	G	L	S	D	V	K	L	S	H	A
Query Conservation													.																							.
Alig confidence													.																							.																																							.
Template Conservation																																																																											.
Template Sequence		S	G	R	R	L	G	Y	T	V	H	E	R	G	T	Y	V	C	I	E	G	P	R	F	S	T	R	A	E	S	R	V	W	K	D	V	F	K	A	D	I	I	G	M	T	L	V	P	E	I	N	L	A	C	E	A	Q	L	C	Y	A	T	L	A	M	V	T	D	Y	D	V	W	A	D	.	R	P	V	T	A	E
Template Known Secondary structure							T					S										S	S													T	S			S				S	S											T	T													T	T	S	S	S	.	S
Template Predicted Secondary structure																																																																											.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	L	A	A	A	E	L	S	K	Q	N	F	I	N	L	I	C	G	F	L	R	K	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	V	E	R	V	M	I	S	N	V	E	R	A	R	R	M	L	Y	D	V	I	P	K	L	A
Template Known Secondary structure																						G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions