Job Description P77329 Confidence 8.00% Date Thu Jan 5 12:27:48 GMT 2012 Rank 89 Aligned Residues 85 % Identity 15% Template c2kzxA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of a3dht5 from clostridium thermocellum,2 northeast structural genomics consortium target cmr116 Resolution UNK

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		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.															.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Query Sequence		S	D	A	R	V	I	P	V	G	P	L	H	I	T	S	D	E	P	G	H	F	R	L	F	V	D	G	E	Q	I	V	D	A	D	Y	R	L	F	Y	V	H	R	G	M	E	K	L	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	R	M	G	Y	N	E	V	T	F	L	S	D	R	.	.	.
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Alig confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Template Conservation
Template Sequence		K	D	G	T	Y	Y	A	E	A	D	D	F	D	E	S	G	W	K	D	T	V	T	I	E	V	K	N	G	K	I	V	S	V	D	W	N	A	I	N	K	D	G	G	D	D	K	D	T	L	S	R	N	G	G	Y	K	M	V	E	Y	G	G	A	Q	A	E	W	H	E	Q	A	E	K	V	E	A	Y	L	V	E
Template Known Secondary structure			S	S							S	S			T	T	S											T	T												T	T	T		S									T					S		S	S	S				S			T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
																	242	.	.	.	.	.	.	.	250	.		.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	C	G	I	C	G	F	A	H	S	.	V	A	Y	T	N	S	V	E	N	A	L	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation
Template Sequence		K	Q	D	P	T	D	I	K	Y	K	D	N	D	G	H	T	D	A	I	S	G	A	T	I	K	V	K	K	F	F	D	L	A	Q	K	A	L	K
Template Known Secondary structure			T		S	S						S	S	S				T	T	T		S			S		T											T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions