Return to main results Retrieve Phyre Job Id

Job DescriptionP05523
Confidence99.78%DateWed Jan 25 15:20:11 GMT 2012
Rank19Aligned Residues91
% Identity29%Templated1tdha1
SCOP infoS13-like H2TH domain S13-like H2TH domain Middle domain of MutM-like DNA repair proteins
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   129130.........140 .........150. ........160.........170.........180.........190........
Predicted Secondary structure 










.



..




















.......
Query SS confidence 











.










. .














































. . . . . . .
Query Sequence  LGPEPLSDDFNG. EYLHQKCAKKK. . TAIKPWLMDNKLVVGVGNIYASESLFAAGIHPDRLASSLSLAECELL. . . . . . .
Query Conservation 



 
      .      
    ..  

  



  








 



 
 
 
      

      
.......
Alig confidence 











.










..














































.......
Template Conservation   




 
   
 
  
  
        
   



   





   



 
 
 
   
  
       
   

  
Template Sequence  RGPCVLQEYQQFRESVLRNLADKAFDRPICEALLDQRFFNGIGNYLRAEILYRLKIPPFEKARSVLEALQPELTLSQKIR
Template Known Secondary structure 



TTT
TTTSGGGGSBTT
TTTSTT

T

TTSBGGG


S
Template Predicted Secondary structure 































Template SS confidence 















































































   133......140.........150.........160.........170.........180.........190.........200.........210..
 
   199200.........210.........
Predicted Secondary structure  ........






Query SS confidence  . . . . . . . .




















Query Sequence  . . . . . . . . ARVIKAVLLRSIEQGGTTLKD
Query Conservation  ........      

  

  

     
Alig confidence  ........




















Template Conservation   
      
     

 
    

  
 
Template Sequence  TKLQNPDLLELCHSVPKEVVQLGGRGYGS
Template Known Secondary structure  TTTS

TT
TT
Template Predicted Secondary structure 









Template SS confidence 




























   218.220.........230.........240......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions