Return to main results Retrieve Phyre Job Id

Job DescriptionP05523
Confidence99.63%DateWed Jan 25 15:20:11 GMT 2012
Rank20Aligned Residues52
% Identity42%Templated1ee8a3
SCOP infoGlucocorticoid receptor-like (DNA-binding domain) Glucocorticoid receptor-like (DNA-binding domain) C-terminal, Zn-finger domain of MutM-like DNA repair proteins
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   218.220.........230.........240.........250.........260.........
Predicted Secondary structure 
































Query SS confidence 



















































Query Sequence  KDFLQSDGKPGYFAQELQVYGRKGEPCRVCGTPIVATKHAQRATFYCRQCQK
Query Conservation         
  
       

 
 
  

 

  
      

 

 

 


Alig confidence 



















































Template Conservation 


    
  
 

  
 

 
 
 

  

  
      

 
  

 

 
Template Sequence  QSYRQPDGLPGGFQTRHAVYGREGLPCPACGRPVERRVVAGRGTHFCPTCQG
Template Known Secondary structure 




TTS


S
GGG
SSTT
TTSB
TTT

B
SSS

TTTTT
Template Predicted Secondary structure 


































Template SS confidence 



















































   212.......220.........230.........240.........250.........260...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions