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Job DescriptionP05523
Confidence97.26%DateWed Jan 25 15:20:11 GMT 2012
Rank27Aligned Residues171
% Identity13%Templatec3doaA_
PDB info PDB header:protein bindingChain: A: PDB Molecule:fibrinogen binding protein; PDBTitle: the crystal structure of the fibrinogen binding protein from2 staphylococcus aureus
Resolution2.81 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30..... ....40... ......50....
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Query Sequence  EVETSRRGIEPHLVGATILHAVVRNGRLRW. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . PVSEEIYR. LSDQPVLSVQR
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Template Sequence  FTKKMVESLQF. LTTGRVHKINQPDNDTILMVVRQNRQNHQLLLSIHPNFSRLQLTTKPPMFARVFRKHLEGGIIESIKQ
Template Known Secondary structure  GG.GTT
TTTT

TTT




TT
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   7..10....... ..20.........30.........40.........50.........60.........70.........80.....
 
   55. ...60...... ...70.........80.........90.........100.........110.........120...
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Query Sequence  RA. . KYLLLELPEG. . . . . . . . . WIIIHLGMSGSLRILPEELPPEKHDHVDLVMSNGKVLRYTDPRRFGAWLWTKELEGH
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Template Sequence  IGNDRRIEIDIKSKDEIGDTIYRTVILEI. . . . . . . . . . . . . . MGKHSNLILVDENRKIIEG. . FKHLTPRTVMPGFNYE
Template Known Secondary structure  STTSS
TTS

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GGG
TT
B..SS
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BSTTSB

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   93......100.........110.........120. ........130.........140 .........150......
 
   124.....130.........140.........150.........160.........170.........180.........190.........200...
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Query Sequence  NVLTHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIK
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Template Sequence  APPTQHKINPY. . DITGAEVLKYIDFNAGNIAKQLLNQ. . FEGFSPLITNEIVSRRQFMTSST. . . . . . . . . . . LPEAFD
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B
GG..G

GGG

GGG

..BTT

TTSSS
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   162.......170.. .......180.........190....... ..200.........210.........220 ......
 
   204....
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Query Sequence  AVLLR
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Template Sequence  EVMAE
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   227..230.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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