Job Description P05523 Confidence 96.44% Date Wed Jan 25 15:20:11 GMT 2012 Rank 31 Aligned Residues 51 % Identity 25% Template c2zkqm_ PDB info PDB header:ribosomal protein/rna Chain: M: PDB Molecule: PDBTitle: structure of a mammalian ribosomal 40s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map Resolution 8.70 Å

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		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	K	T	A	I	K	P	W	L	M	D	N	K	L	V	V	G	V	G	N	I	Y	A	S	E	S	L	F	A	A	G	I	H	P	D	R	L	A	S	S	L	S	L	A	E	C	E	L	L	A	R	V	I
Query Conservation
Alig confidence														.	.	.
Template Conservation														.	.	.
Template Sequence		D	G	R	R	K	I	A	F	A	I	T	A	.	.	.	I	K	G	V	G	R	R	Y	A	H	V	V	L	R	K	A	D	I	D	L	T	K	R	A	G	E	L	T	E	D	E	V	E	R	V	I	T	I	M
Template Known Secondary structure				S	S	B					G	G	G	.	.	.	S	T	T														T			T	T	S	B	T	T	T	S
Template Predicted Secondary structure														.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.				.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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