Job Description P05523 Confidence 22.32% Date Wed Jan 25 15:20:11 GMT 2012 Rank 139 Aligned Residues 82 % Identity 15% Template c2zetD_ PDB info PDB header:signaling protein Chain: D: PDB Molecule:melanophilin; PDBTitle: crystal structure of the small gtpase rab27b complexed with2 the slp homology domain of slac2-a/melanophilin Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		188	.	190	.	.	.	.	.	.	.	.																		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	S	L	S	L	A	E	C	E	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R	V	I	K	A	V	L	L	R	S	I	E	Q	G	G	T	T	L	K	D	F	L	Q	S	D	G	K	P	G	Y	F	A	Q	E	L	Q	V	Y	G	R	K	G	E	P	C	R	V	C	G	T	P
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	T	L	T	D	E	E	A	E	H	V	W	A	V	V	Q	R	D	F	D	L	R	R	R	E	E	E	R	L	Q	G	L	K	G	K	I	Q	K	E	S	S	K	R	E	L	L	S	D	T	A	H	L	N	E	T	H	C	A	R	C	L	Q	P	Y	R	L	L	L	N	S	R	R	Q	C	L	E	C	S	L	F
Template Known Secondary structure		T	S	S																																											G	G	G	S	T	T					B		S	S	S			B	G	G	G		S	S						T	T	T
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		251				.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.
Query SS confidence			.	.	.
Query Sequence		I	.	.	.	V	A	T	K	H	A	Q	R	A	T	F	Y	C	R	Q	C	Q	K
Query Conservation			.	.	.
Alig confidence			.	.	.
Template Conservation
Template Sequence		V	C	K	S	C	S	H	A	H	P	E	E	Q	G	W	L	C	D	P	C	H	L
Template Known Secondary structure				G	G	G					S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions