Job Description P05523 Confidence 100.00% Date Wed Jan 25 15:20:11 GMT 2012 Rank 1 Aligned Residues 268 % Identity 40% Template c2f5qA_ PDB info PDB header:hydrolase/dna Chain: A: PDB Molecule:formamidopyrimidine-dna glycosidase; PDBTitle: catalytically inactive (e3q) mutm crosslinked to oxog:c2 containing dna cc2 Resolution 2.35 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.				.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.
Query SS confidence																																				.	.	.
Query Sequence		P	E	L	P	E	V	E	T	S	R	R	G	I	E	P	H	L	V	G	A	T	I	L	H	A	V	V	R	N	G	R	L	R	W	.	.	.	P	V	S	E	E	I	Y	R	L	S	D	Q	P	V	L	S	V	Q	R	R	A	K	Y	L	L	L	E	L	P	E	G	W	I	I	I	H	L	G	M	S	G	S	L
Query Conservation																																				.	.	.
Alig confidence																																				.	.	.
Template Conservation
Template Sequence		P	Q	L	P	E	V	E	T	I	R	R	T	L	L	P	L	I	V	G	K	T	I	E	D	V	R	I	F	W	P	N	I	I	R	H	P	R	D	S	E	A	F	A	A	R	M	I	G	Q	T	V	R	G	L	E	R	R	G	K	F	L	K	F	L	L	D	R	D	A	L	I	S	H	L	R	M	E	G	R	Y
Template Known Secondary structure																			T	T		B							S		G	G	G				S	S	S									T	T		B								T	T							S	S								T	T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.			.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																									.	.
Query SS confidence																																									.	.
Query Sequence		R	I	L	P	E	E	L	P	P	E	K	H	D	H	V	D	L	V	M	S	N	G	K	V	L	R	Y	T	D	P	R	R	F	G	A	W	L	W	T	.	.	K	E	L	E	G	H	N	V	L	T	H	L	G	P	E	P	L	S	D	D	F	N	G	E	Y	L	H	Q	K	C	A	K	K	K	T	A	I	K	P
Query Conservation																																									.	.
Alig confidence																																									.	.
Template Conservation
Template Sequence		A	V	A	S	A	L	E	P	L	E	P	H	T	H	V	V	F	C	F	T	D	G	S	E	L	R	Y	R	D	V	R	K	F	G	T	M	H	V	Y	A	K	E	E	A	D	R	R	P	P	L	A	E	L	G	P	E	P	L	S	P	A	F	S	P	A	V	L	A	E	R	A	V	K	T	K	R	S	V	K	A
Template Known Secondary structure						T	T	S				T	T								T	T	S								T	T														T	T	S	T	T	T	T	T					T	T	S	T	T	S										T	T			S	B
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	L	M	D	N	K	L	V	V	G	V	G	N	I	Y	A	S	E	S	L	F	A	A	G	I	H	P	D	R	L	A	S	S	L	S	L	A	E	C	E	L	L	A	R	V	I	K	A	V	L	L	R	S	I	E	Q	G	G	T	T	L	K	D	F	L	Q	S	D	G	K	P	G	Y	F	A	Q	E	L	Q	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	L	D	C	T	V	V	A	G	F	G	N	I	Y	V	D	E	S	L	F	R	A	G	I	L	P	G	R	P	A	A	S	L	S	S	K	E	I	E	R	L	H	E	E	M	V	A	T	I	G	E	A	V	M	K	G	G	S	T	V	R	T	Y	V	N	T	Q	G	E	A	G	T	F	Q	H	H	L	Y	V
Template Known Secondary structure				T		T	T	T	S	S	S													T	T			T	T	S	B	G	G	G																							T	T				S	S	S				T	T	S				S	G	G	G	G		S	S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	R	K	G	E	P	C	R	V	C	G	T	P	I	V	A	T	K	H	A	Q	R	A	T	F	Y	C	R	Q	C	Q	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	G	R	Q	G	N	P	C	K	R	C	G	T	P	I	E	K	T	V	V	A	G	R	G	T	H	Y	C	P	R	C	Q	R
Template Known Secondary structure		T	T		B	T	S	B		T	T	T			B	B						T	T							T	T	T
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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