Job Description P05523 Confidence 95.33% Date Wed Jan 25 15:20:11 GMT 2012 Rank 34 Aligned Residues 102 % Identity 23% Template c1mx0D_ PDB info PDB header:isomerase Chain: D: PDB Molecule:type ii dna topoisomerase vi subunit b; PDBTitle: structure of topoisomerase subunit Resolution 2.30 Å

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		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.			.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.
Query SS confidence																																																														.	.
Query Sequence		K	H	D	H	V	D	L	V	M	S	N	G	K	V	L	R	Y	T	D	P	R	R	F	G	A	W	L	W	T	K	E	L	E	G	H	N	V	L	T	H	L	G	P	E	P	L	S	D	D	F	N	G	E	Y	L	H	Q	K	C	A	.	.	K	K	K	T	A	I	K	P	W	L	M	D	N	K	L	V	V	G
Query Conservation																																																														.	.
Alig confidence																			.	.																.	.	.	.	.	.	.	.					.	.													.	.													.	.
Template Conservation																			.	.																.	.	.	.	.	.	.	.					.	.																											.	.
Template Sequence		P	Y	A	E	F	I	F	K	D	P	E	G	N	V	T	Y	Y	.	.	P	R	L	T	N	K	I	P	K	P	P	Q	E	V	K	.	.	.	.	.	.	.	.	P	H	P	Y	.	.	G	V	D	R	E	E	I	K	I	L	I	N	N	L	K	R	D	Y	T	I	K	E	F	L	V	N	.	.	E	F	Q	S
Template Known Secondary structure		T	T								T	T	S						.	.					S											.	.	.	.	.	.	.	.			S	T	.	.	T												T		S	S			B								.	.			T	T
Template Predicted Secondary structure																			.	.																.	.	.	.	.	.	.	.					.	.																											.	.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.			.	.	.	.	220	.	.	.	.	.	.	.	.	.	230									.	.	.	.			.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260			.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	N	I	Y	A	S	E	S	L	F	A	A	G	I	H	P	D	R	L	A	S	S	L	S	L	A	E	C	E	L	L	A	R	V	I	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	G	D	T	T	A	D	K	I	L	E	L	A	G	L	K	P	N	K	K	V	K	N	L	T	E	E	E	I	T	R	L	V	E	T	F	K	K
Template Known Secondary structure															T			T	T	S	B	G	G	G
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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