Job Description P0AE67 Confidence 38.19% Date Thu Jan 5 11:22:39 GMT 2012 Rank 323 Aligned Residues 97 % Identity 9% Template c3l4bG_ PDB info PDB header:transport protein Chain: G: PDB Molecule:trka k+ channel protien tm1088b; PDBTitle: crystal structure of an octomeric two-subunit trka k+ channel ring2 gating assembly, tm1088a:tm1088b, from thermotoga maritima Resolution 3.45 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	L	K	F	L	V	V	D	D	F	S	T	M	R	R	I	V	R	N	L	L	K	E	L	G	F	N	N	V	E	E	A	E	D	G	V	D	A	L	N	K	L	Q	A	G	G	Y	G	F	V	I	S	D	W	N	M	P	N	M	D	G	L	E	L	L	K	T	I	R	A	D	G	A	M	S	A	L	P	V
Query Conservation
Alig confidence																		.	.	.																																					.	.	.
Template Conservation																		.	.	.																																					.	.	.
Template Sequence		R	K	Y	G	V	V	I	I	N	K	D	R	E	L	C	E	.	.	.	E	F	A	K	K	L	K	A	T	I	I	H	G	D	G	S	H	K	E	I	L	R	D	A	E	V	S	K	N	D	V	V	V	I	L	T	.	.	.	P	R	D	E	V	N	L	F	I	A	Q	L	V	M	K	D	F	G	V	K	R	V
Template Known Secondary structure		T	T								S							.	.	.						S	S	S					S		T	T	S								T			T	T								.	.	.	S															T	S
Template Predicted Secondary structure																		.	.	.																																					.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.				.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.				.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	V	T	A	E	A	K	K	E	N	I	I	A	A	A	Q	A	G	A	S	G	Y	V	V
Query Conservation
Alig confidence								.	.
Template Conservation								.	.
Template Sequence		V	S	L	V	N	D	.	.	P	G	N	M	E	I	F	K	K	M	G	I	T	T	V	L	N
Template Known Secondary structure							S	.	.	G	G	G								T
Template Predicted Secondary structure								.	.
Template SS confidence
		96	.	.	.	100	.			.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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