Job Description P0AE67 Confidence 21.66% Date Thu Jan 5 11:22:39 GMT 2012 Rank 400 Aligned Residues 111 % Identity 22% Template c2yv1A_ PDB info PDB header:ligase Chain: A: PDB Molecule:succinyl-coa ligase [adp-forming] subunit alpha; PDBTitle: crystal structure of succinyl-coa synthetase alpha chain from2 methanocaldococcus jannaschii dsm 2661 Resolution 1.70 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		M	A	D	K	E	L	K	F	L	V	V	D	D	F	S	T	M	R	R	I	V	R	N	L	L	K	E	L	G	F	N	N	V	E	E	A	E	D	G	V	D	A	L	N	K	L	Q	A	G	G	Y	G	F	V	I	S	D	W	N	M	P	N	M	D	G	L	E	L	L	K	T	I	R	A	D	G	A	M	.	.
Query Conservation																																																																																.	.
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	D	E	N	T	K	A	I	V	Q	G	I	T	G	R	Q	G	S	F	H	T	K	K	M	L	E	C	G	T	K	I	V	G	G	V	T	P	G	K	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	N	V	H	G	V	P	V	F	D	T	V	K	E	A	V	K	E	T	D
Template Known Secondary structure		S	S		T	T							T	T	T	S													T	T									T	T		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T				T	T					S	S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.																			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		S	A	L	P	V	L	M	V	T	A	E	A	K	K	E	N	I	I	A	A	A	Q	A	G	A	S	G	Y	V	V	K	.	P	F	T	A	A	T	L	E	E	K	L	N	K	I	F	E	K	L	G	M
Query Conservation																																	.
Alig confidence																																	.
Template Conservation
Template Sequence		A	N	A	S	V	I	F	V	P	A	P	F	A	K	D	A	V	F	E	A	I	D	A	G	I	E	L	I	V	V	I	T	E	H	I	P	V	H	D	T	M	E	F	V	N	Y	A	E	D	V	G	V
Template Known Secondary structure																								T	T		S							S																		T
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions