Job Description P0AE67 Confidence 29.46% Date Thu Jan 5 11:22:39 GMT 2012 Rank 355 Aligned Residues 85 % Identity 14% Template c2wv9A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:flavivirin protease ns2b regulatory subunit, flavivirin PDBTitle: crystal structure of the ns3 protease-helicase from murray2 valley encephalitis virus Resolution 2.75 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.												.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.				.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.																	.	.	.										.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.																	.	.	.										.
Query Sequence		K	E	L	K	F	L	V	V	D	D	F	S	T	M	R	R	I	V	R	N	L	L	K	E	L	G	F	N	N	.	.	.	.	.	.	.	.	.	.	.	V	E	E	A	E	D	G	V	D	A	L	N	K	L	Q	A	.	.	.	G	G	Y	G	F	V	I	S	D	.	W	N	M	P	N	M	D	G	L	E	L
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.																	.	.	.										.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.																	.	.	.										.
Template Conservation
Template Sequence		K	R	L	R	T	A	V	L	A	P	T	R	V	V	A	A	E	M	A	E	A	L	R	G	L	P	V	R	Y	L	T	P	R	E	H	S	G	N	E	I	V	D	V	M	C	H	A	T	L	T	H	R	L	M	S	P	L	R	V	P	N	Y	N	L	F	V	M	D	E	A	H	F	T	D	P	A	S	I	A	A
Template Known Secondary structure		T	T								S	S											T	T	T	S												S																		S	S	S						S						S	T	T
Template Predicted Secondary structure
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	T	I	R	A	D	G	A	M	S	A	L	P	V	L	M	V	T	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	G	Y	I	A	T	R	V	E	A	G	E	A	A	A	I	F	M	T	A
Template Known Secondary structure											T	T	S								S
Template Predicted Secondary structure
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions