Job Description P0AE67 Confidence 84.60% Date Thu Jan 5 11:22:39 GMT 2012 Rank 160 Aligned Residues 116 % Identity 14% Template c2w27A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:ykui protein; PDBTitle: crystal structure of the bacillus subtilis ykui protein,2 with an eal domain, in complex with substrate c-di-gmp and3 calcium Resolution 2.80 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		V	D	D	F	S	T	M	R	R	I	V	R	N	L	L	K	E	L	G	F	N	.	N	V	E	E	A	E	D	G	V	D	A	L	N	K	L	Q	A	G	G	Y	G	F	V	I	S	D	W	N	M	P	N	M	D	G	L	E	L	L	K	T	I	R	A	D	G	A	M	S	A	L	P	V	L	M	V	T	A	E
Query Conservation																							.
Alig confidence																							.																																																						.
Template Conservation																																																																													.
Template Sequence		F	E	G	D	I	E	Q	L	Y	H	M	L	A	Y	Y	R	T	Y	G	I	K	I	A	V	D	N	I	G	K	E	S	S	N	L	D	R	I	A	L	L	S	P	D	L	L	K	I	D	L	Q	A	L	S	P	S	Y	E	H	V	L	Y	S	I	S	L	L	A	R	K	I	G	A	A	L	L	.	Y	E	D	I
Template Known Secondary structure				S														T	T	T									T	T	T	B												S							T	T																				T					.
Template Predicted Secondary structure																																																																													.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.					.	.	.	110					.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.					.	.	.	.
Query SS confidence																			.	.	.	.					.	.	.	.
Query Sequence		A	K	K	E	N	I	I	A	A	A	Q	A	G	A	S	G	Y	.	.	.	.	V	V	K	P	.	.	.	.	F	T	A	A	T	L	E	E	K	L	N	K	I	F	E	K	L
Query Conservation																			.	.	.	.					.	.	.	.
Alig confidence																			.	.	.	.					.	.	.	.
Template Conservation
Template Sequence		E	A	N	F	Q	L	Q	Y	A	W	R	N	G	G	R	Y	F	Q	G	Y	Y	L	V	S	P	S	E	T	F	L	E	R	D	V	L	K	Q	R	L	K	T	E	F	H	Q	F
Template Known Secondary structure			S										T	T						S	T	T	T				B	S	S				T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions