Job Description P0AE67 Confidence 88.46% Date Thu Jan 5 11:22:39 GMT 2012 Rank 139 Aligned Residues 119 % Identity 11% Template c2q5cA_ PDB info PDB header:transcription Chain: A: PDB Molecule:ntrc family transcriptional regulator; PDBTitle: crystal structure of ntrc family transcriptional regulator from2 clostridium acetobutylicum Resolution 1.49 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.			.	50	.	.	.	.	.																		.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure																																														.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	L	K	F	L	V	V	D	D	F	S	T	M	R	R	I	V	R	N	L	L	K	E	L	G	F	N	N	V	E	E	A	E	D	G	V	D	A	L	N	K	L	Q	A	.	.	G	G	Y	G	F	V	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	D	W	N	M	P	N	M	D	G
Query Conservation																																														.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																														.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.
Template Conservation																																																																											.	.	.
Template Sequence		S	L	K	I	A	L	I	S	Q	N	E	N	L	L	N	L	F	P	K	L	A	L	E	K	N	F	I	P	I	T	K	T	A	S	L	T	R	A	S	K	I	A	F	G	L	Q	D	E	V	D	A	I	I	S	R	G	A	T	S	D	Y	I	K	K	S	V	S	I	P	S	I	S	I	.	.	.	K	V	T	R
Template Known Secondary structure										S																T																					T	T	T		S														T	T		S	S						.	.	.
Template Predicted Secondary structure																																																																											.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.				.	.	.	.
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	L	L	K	T	I	R	A	D	G	A	M	S	A	L	P	V	L	M	V	T	A	E	A	K	K	E	N	I	I	A	A	A	Q	A	G	A	S	G	Y	V	V	K	P	F	T	A	A	T	L	E	E	K	L	N	K	I	F	E	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	D	T	M	R	A	V	Y	N	A	K	R	F	G	N	E	L	A	L	I	A	Y	K	H	S	I	V	D	K	H	E	I	E	A	M	L	G	V	K	I	K	E	F	L	F	S	S	E	D	E	I	T	T	L	I	S	K	V	K	T	E
Template Known Secondary structure												G	G	G		S								S	S		S	S										T										S	G	G	G											T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions