Job Description P0AE67 Confidence 30.18% Date Thu Jan 5 11:22:39 GMT 2012 Rank 353 Aligned Residues 81 % Identity 9% Template c1sxjA_ PDB info
PDB header: replicationChain: A: PDB Molecule: activator 1 95 kda subunit;
PDBTitle: crystal structure of the eukaryotic clamp loader2 (replication factor c, rfc) bound to the dna sliding clamp3 (proliferating cell nuclear antigen, pcna)
Resolution 2.85 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
48 . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . .
Predicted Secondary structure
.
Query SS confidence
.
Query Sequence
A G G Y G F V I S D .
W N M P N M D G L E L L K T I R A D G A M S A L P V L M V T A E A K K E N I I A A A Q A G A S G Y V V K P F T A A T L E E K L N K I F E K
Query Conservation
.
Alig confidence
. .
Template Conservation
.
Template Sequence
N G K H F V I I M D E V D G M S G G D R G G V G Q L A Q F C R K T S T P L I L I .
C N E R N L P K M R P F D R V C L D I Q F R R P D A N S I K S R L M T I A I R
Template Known Secondary structure
S T T S S G G G T T S T T S S . S T T S S T T G G G T T T S
Template Predicted Secondary structure
.
Template SS confidence
415 . . . . 420 . . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . . . 490 . . .
127 . .
Predicted Secondary structure
Query SS confidence
Query Sequence
L G M
Query Conservation
Alig confidence
Template Conservation
Template Sequence
E K F
Template Known Secondary structure
T
Template Predicted Secondary structure
Template SS confidence
494 . .
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre serverKelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]
