Job Description P07003 Confidence 97.35% Date Thu Jan 5 10:59:55 GMT 2012 Rank 99 Aligned Residues 169 % Identity 14% Template d2ozlb1 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Branched-chain alpha-keto acid dehydrogenase Pyr module Resolution 1.90

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20			.	.	.	.	.	.	.	.										.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.									.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.									.	.	.	.	.	.	.	.	.
Query Sequence		M	K	Q	T	V	A	A	Y	I	A	K	T	L	E	S	A	G	V	K	R	.	.	I	W	G	V	T	G	D	S	.	.	.	.	.	.	.	.	.	L	N	G	L	S	D	S	L	N	R	M	G	T	I	E	W	M	S	T	R	H	E	E	V	A	A	F	A	A	G	A	E	A	Q	L	S	G	E	L	A	V
Query Conservation																						.	.									.	.	.	.	.	.	.	.	.
Alig confidence																						.	.									.	.	.	.	.	.	.	.	.																	.	.																	.
Template Conservation																																																									.	.																	.
Template Sequence		L	Q	V	T	V	R	D	A	I	N	Q	G	M	D	E	E	L	E	R	D	E	K	V	F	L	L	G	E	E	V	A	Q	Y	D	G	A	Y	K	V	S	R	G	L	W	K	K	Y	G	D	K	R	I	I	D	T	.	.	P	I	S	E	M	G	F	A	G	I	A	V	G	A	A	M	.	A	G	L	R	P	I
Template Known Secondary structure																						T	T						T	T	S	S	T	T			T	T	S	T	T	T	T							T	T	T					.	.		S															.	T	T
Template Predicted Secondary structure																																																									.	.																	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90										.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.																																			.
Query SS confidence																							.	.	.	.	.	.	.	.	.																																			.
Query Sequence		C	A	G	S	C	G	P	G	N	L	H	L	I	N	G	L	F	D	C	H	R	.	.	.	.	.	.	.	.	.	N	H	V	P	V	L	A	I	A	A	H	I	P	S	S	E	I	G	S	G	Y	F	Q	E	T	H	P	Q	E	L	F	R	E	C	.	S	H	Y	C	E	L	V	S	S	P	E	Q	I	P	Q
Query Conservation																							.	.	.	.	.	.	.	.	.																																			.
Alig confidence																							.	.	.	.	.	.	.	.	.																.	.																		.
Template Conservation																																															.	.
Template Sequence		C	E	F	M	T	F	N	F	S	M	Q	A	I	D	Q	V	I	N	S	A	A	K	T	Y	Y	M	S	G	G	L	Q	P	V	P	I	V	F	R	G	P	N	G	A	S	A	.	.	G	V	A	A	Q	H	S	Q	C	F	A	A	W	Y	G	H	C	P	G	L	K	V	V	S	P	W	N	S	E	D	A	K	G
Template Known Secondary structure					S	S	G	G	G	G	G	G	G						T	T	T	T	T					T	T	S	S												S			S	.	.	S			G	G	G										T	S	T	T								S
Template Predicted Secondary structure																																															.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.			.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	A	I	A	M	R	K	A	V	L	N	R	G	V	S	V	V	V	L	P	G	D	V	A	L	K	P	A	P	E	G	A	T	M	H	W	Y	H
Query Conservation
Alig confidence								.	.	.	.
Template Conservation								.	.	.	.
Template Sequence		L	I	K	S	A	I	.	.	.	.	R	D	N	N	P	V	V	V	L	E	N	E	L	M	Y	G	V	P	F	E	F	P	P	E	A	Q	S	K	D
Template Known Secondary structure								.	.	.	.		S	S	S												T											S	T	T
Template Predicted Secondary structure								.	.	.	.
Template SS confidence
		156	.	.	.	160	.					.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions