Job Description P07003 Confidence 100.00% Date Thu Jan 5 10:59:55 GMT 2012 Rank 25 Aligned Residues 216 % Identity 29% Template d2ez9a3 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Pyruvate oxidase and decarboxylase PP module Resolution 1.60

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	E	K	A	I	H	P	Q	Y	L	A	Q	Q	I	S	H	F	A	A	D	D	A	I	F	T	C	D	V	G	T	P	T	V	W	A	A	R	Y	L	K	M	N	G	K	R	R	L	L	G	S	F	N	H	G	S	M	A	N	A	M	P	Q	A	L	G	A	Q	A	T	E	P	E	R	Q	V	V	A	M	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	Q	E	G	P	L	Q	A	Y	Q	V	L	R	A	V	N	K	I	A	E	P	D	A	I	Y	S	I	D	V	G	D	I	N	L	N	A	N	R	H	L	K	L	T	P	S	N	R	H	I	T	S	N	L	F	A	T	M	G	V	G	I	P	G	A	I	A	A	K	L	N	Y	P	E	R	Q	V	F	N	L	A
Template Known Secondary structure				S	S	B																T	T							S	S														T	T								S	S			T	T														T	T	S
Template Predicted Secondary structure
Template SS confidence
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
		432	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.		.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		G	D	G	G	F	S	M	L	M	G	D	F	L	S	V	V	Q	M	K	L	P	V	K	I	V	V	F	N	N	S	V	L	G	F	V	A	M	E	M	K	A	G	G	Y	.	L	T	D	G	T	E	L	H	D	T	N	F	A	R	I	A	E	A	C	G	I	T	G	I	R	V	E	K	A	S	E	V	D	E	A
Query Conservation																																														.
Alig confidence																																														.
Template Conservation
Template Sequence		G	D	G	G	A	S	M	T	M	Q	D	L	A	T	Q	V	Q	Y	H	L	P	V	I	N	V	V	F	T	N	C	Q	Y	G	W	I	K	D	E	Q	E	D	T	N	Q	N	D	F	I	G	V	E	F	N	D	I	D	F	S	K	I	A	D	G	V	H	M	Q	A	F	R	V	N	K	I	E	Q	L	P	D	V
Template Known Secondary structure										G	G	G							T	T											S	B													S	S				S	S	B													T	T								B	G	G	G
Template Predicted Secondary structure
Template SS confidence
		446	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.
		511	.	.			.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		L	Q	R	.	.	A	F	S	I	D	G	P	V	L	V	D	V	V	V	A	K	E	E	L	A	I	P	P	Q	I	K	L	E	Q	A	K	G	F	S	L	Y	M	L	R	A	I	I	S	G	R	G	D	E	V	I	E	L	A	K	T
Query Conservation					.	.
Alig confidence					.	.																																.
Template Conservation																																						.
Template Sequence		F	E	Q	A	K	A	I	A	Q	H	E	P	V	L	I	D	A	V	I	T	G	D	R	P	L	P	A	E	K	L	R	L	D	S	A	M	.	S	S	A	A	D	I	E	A	F	K	Q	R	Y	E	A	Q	D	L	Q	P	L	S	T
Template Known Secondary structure									T	T	T	S																T	T	S					T	T	T	.	S													T		T	T
Template Predicted Secondary structure																																						.
Template SS confidence
		526	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.		.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions