Job Description P07003 Confidence 95.19% Date Thu Jan 5 10:59:55 GMT 2012 Rank 123 Aligned Residues 164 % Identity 15% Template d2bfdb1 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Branched-chain alpha-keto acid dehydrogenase Pyr module Resolution 1.39

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.				.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.															.
Query SS confidence																											.	.	.															.
Query Sequence		M	K	Q	T	V	A	A	Y	I	A	K	T	L	E	S	A	G	V	K	R	I	W	G	V	T	.	.	.	G	D	S	L	N	G	L	S	D	S	L	N	R	M	.	G	T	I	E	W	M	S	T	R	H	E	E	V	A	A	F	A	A	G	A	E	A	Q	L	S	G	E	L	A	V	C	A	G	S	C	G	P
Query Conservation																											.	.	.															.
Alig confidence																											.	.	.															.																													.
Template Conservation																																																																									.
Template Sequence		L	F	Q	S	V	T	S	A	L	D	N	S	L	A	K	D	P	T	A	V	I	F	G	E	D	V	A	F	G	G	V	F	R	C	T	V	G	L	R	D	K	Y	G	K	D	R	V	F	N	T	P	L	C	E	Q	G	I	V	G	F	G	I	G	I	A	V	T	G	A	T	A	.	I	A	E	I	Q	F	A	D
Template Known Secondary structure																		T	T						T	T	T	T	T	T		T	T	S	T	T	T	T							T	T	T						S															T	T				.					S	S	G	G
Template Predicted Secondary structure																																																																									.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90										.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.																																			.
Query SS confidence																.	.	.	.	.	.	.	.	.																																			.
Query Sequence		G	N	L	H	L	I	N	G	L	F	D	C	H	R	.	.	.	.	.	.	.	.	.	N	H	V	P	V	L	A	I	A	A	H	I	P	S	S	E	I	G	S	G	Y	F	Q	E	T	H	P	Q	E	L	F	R	E	C	.	S	H	Y	C	E	L	V	S	S	P	E	Q	I	P	Q	V	L	A	I	A	M	R
Query Conservation																.	.	.	.	.	.	.	.	.																																			.
Alig confidence																.	.	.	.	.	.	.	.	.																												.							.
Template Conservation																																																				.
Template Sequence		Y	I	F	P	A	F	D	Q	I	V	N	E	A	A	K	Y	R	Y	R	S	G	D	L	F	N	C	G	S	L	T	I	R	S	P	W	G	C	V	G	H	G	A	L	Y	H	S	Q	S	P	E	.	A	F	F	A	H	C	P	G	I	K	V	V	I	P	R	S	P	F	Q	A	K	G	L	L	L	S	C	I	E
Template Known Secondary structure		G		G	G	G						T	T	G	G	G					T	T	T	S	S			T	T								S			S	S		G	G	G	S	S					.					T	S	T	T							S	S
Template Predicted Secondary structure																																																				.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	V	L	N	R	G	V	S	V	V	V	L	P	G	D	V	A	L	K	P	A	P	E
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	D	K	N	P	C	I	F	F	E	P	K	I	L	Y	R	A	A	A	E	E
Template Known Secondary structure		.	.	.	.	S	S	S								G	G	G	T	T	S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions