Job Description P07003 Confidence 97.00% Date Thu Jan 5 10:59:55 GMT 2012 Rank 105 Aligned Residues 155 % Identity 14% Template d1w85b1 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Branched-chain alpha-keto acid dehydrogenase Pyr module Resolution 2.0

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20			.	.	.	.							.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																					.	.					.	.	.	.	.	.																.
Query SS confidence																					.	.					.	.	.	.	.	.																.
Query Sequence		K	Q	T	V	A	A	Y	I	A	K	T	L	E	S	A	G	V	K	R	.	.	I	W	G	V	.	.	.	.	.	.	T	G	D	S	L	N	G	L	S	D	S	L	N	R	M	.	G	T	I	E	W	M	S	T	R	H	E	E	V	A	A	F	A	A	G	A	E	A	Q	L	S	G	E	L	A	V	C	A	G
Query Conservation																					.	.					.	.	.	.	.	.																.
Alig confidence																					.	.					.	.	.	.	.	.																.																								.
Template Conservation																																																																								.
Template Sequence		Q	M	T	M	V	Q	A	I	T	D	A	L	R	I	E	L	K	N	D	P	N	V	L	I	F	G	E	D	V	G	V	N	G	G	V	F	R	A	T	E	G	L	Q	A	E	F	G	E	D	R	V	F	D	T	P	L	A	E	S	G	I	G	G	L	A	I	G	L	A	L	.	Q	G	F	R	P	V	P	E	I
Template Known Secondary structure																					T	T						T	T		S	T	T			T	T	S	T	T	T	T							T	T	T						S															.	T	T						B
Template Predicted Secondary structure																																																																								.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.										90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.																																				.
Query SS confidence																			.	.	.	.	.	.	.	.	.																																				.
Query Sequence		S	C	G	P	G	N	L	H	L	I	N	G	L	F	D	C	H	.	.	.	.	.	.	.	.	.	R	N	H	V	P	V	L	A	I	A	A	H	I	P	S	S	E	I	G	S	G	Y	F	Q	E	T	H	P	Q	E	L	F	R	E	C	.	S	H	Y	C	E	L	V	S	S	P	E	Q	I	P	Q	V	L	A
Query Conservation																			.	.	.	.	.	.	.	.	.																																				.
Alig confidence																			.	.	.	.	.	.	.	.	.																.	.																			.
Template Conservation																																											.	.
Template Sequence		Q	F	F	G	F	V	Y	E	V	M	D	S	I	C	G	Q	M	A	R	I	R	Y	R	T	G	G	R	Y	H	M	P	I	T	I	R	S	P	F	G	G	G	.	.	V	H	T	P	E	L	H	S	D	S	L	E	G	L	V	A	Q	Q	P	G	L	K	V	V	I	P	S	T	P	Y	D	A	K	G	L	L	I
Template Known Secondary structure		S	S	G	G	G	G	G	G	T						T	T	G	G	G					T	T	T	S	S												S	S	.	.	S				T	T	S	S								T	T	S	T	T							S	S
Template Predicted Secondary structure																																											.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.			.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	M	R	K	A	V	L	N	R	G	V	S	V	V	V	L	P	G	D	V
Query Conservation
Alig confidence						.	.	.	.
Template Conservation						.	.	.	.
Template Sequence		S	A	I	R	.	.	.	.	D	N	D	P	V	I	F	L	E	H	L	K	L
Template Known Secondary structure						.	.	.	.	S	S	S								T	T	T
Template Predicted Secondary structure						.	.	.	.
Template SS confidence
		159	160	.	.					.	.	.	.	.	.	.	170	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions