Job Description P07003 Confidence 96.42% Date Thu Jan 5 10:59:55 GMT 2012 Rank 110 Aligned Residues 168 % Identity 14% Template d1qs0b1 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Branched-chain alpha-keto acid dehydrogenase Pyr module Resolution 2.40

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.					.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.																										.
Query SS confidence																					.	.	.	.																										.
Query Sequence		V	A	A	Y	I	A	K	T	L	E	S	A	G	V	K	R	I	W	G	.	.	.	.	V	T	G	D	S	L	N	G	L	S	D	S	L	N	R	M	G	T	I	E	W	M	S	T	R	.	H	E	E	V	A	A	F	A	A	G	A	E	A	Q	L	S	G	E	L	A	V	C	A	G	S	C	G	P	G	N	L
Query Conservation																					.	.	.	.																										.
Alig confidence																					.	.	.	.																										.
Template Conservation
Template Sequence		L	R	S	A	X	D	V	X	L	E	R	D	D	N	V	V	V	Y	G	Q	D	V	G	Y	F	G	G	V	F	R	C	T	E	G	L	Q	T	K	Y	G	K	S	R	V	F	D	A	P	I	S	E	S	G	I	V	G	T	A	V	G	X	G	A	Y	G	L	R	P	V	V	E	I	Q	F	A	D	Y	F	Y	P
Template Known Secondary structure														T	T						T	T		S	S	S			T	T	S	T	T	T	T							T	T	T						S																T								S		G	G	G		G	G
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		80	.	.	.	.	.	.	.	.	.	90									.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure													.	.	.	.	.	.	.	.																																			.
Query SS confidence													.	.	.	.	.	.	.	.																																			.
Query Sequence		H	L	I	N	G	L	F	D	C	H	R	.	.	.	.	.	.	.	.	N	H	V	P	V	L	A	I	A	A	H	I	P	S	S	E	I	G	S	G	Y	F	Q	E	T	H	P	Q	E	L	F	R	E	C	.	S	H	Y	C	E	L	V	S	S	P	E	Q	I	P	Q	V	L	A	I	A	M	R	K	A	V	L
Query Conservation													.	.	.	.	.	.	.	.																																			.
Alig confidence													.	.	.	.	.	.	.	.															.	.																			.																							.	.	.	.
Template Conservation																																			.	.																																										.	.	.	.
Template Sequence		A	S	D	Q	I	V	S	E	X	A	R	L	R	Y	R	S	A	G	E	F	I	A	P	L	T	L	R	X	P	C	G	G	G	.	.	I	Y	G	G	Q	T	H	S	Q	S	P	E	A	X	F	T	Q	V	C	G	L	R	T	V	X	P	S	N	P	Y	D	A	K	G	L	L	I	A	S	I	E	.	.	.	.
Template Known Secondary structure		G						T	T	T	T	T					T	T	T	S	S													S	.	.	S	S			S	S	S	S								T	T	S	T	T								S														.	.	.	.
Template Predicted Secondary structure																																			.	.																																										.	.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.			.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	G	V	S	V	V	V	L	P	G	D	V	A	L	K	P	A	P	E	G	A	T	M	H	W	Y	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	D	D	P	V	I	F	L	E	P	K	R	L	Y	N	G	P	F	D	G	H	H	D	R	P	V	T	P
Template Known Secondary structure		S	S	S								G	G	G	S	S	S				S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions