Job Description P07003 Confidence 100.00% Date Thu Jan 5 10:59:55 GMT 2012 Rank 45 Aligned Residues 181 % Identity 17% Template d1pvda3 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Pyruvate oxidase and decarboxylase PP module Resolution 2.30

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		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.					.	.	.	.	.	.
Predicted Secondary structure																																																																								.	.	.	.
Query SS confidence																																																																								.	.	.	.
Query Sequence		S	E	K	A	I	H	P	Q	Y	L	A	Q	Q	I	S	H	F	A	A	D	D	A	I	F	T	C	D	V	G	T	P	T	V	W	A	A	R	Y	L	K	M	N	G	K	R	R	L	L	G	S	F	N	H	G	S	M	A	N	A	M	P	Q	A	L	G	A	Q	A	T	E	.	.	.	.	P	E	R	Q	V	V
Query Conservation																																																																								.	.	.	.
Alig confidence																																				.																																				.	.	.	.
Template Conservation																																				.
Template Sequence		A	S	T	P	L	K	Q	E	W	M	W	N	Q	L	G	N	F	L	Q	E	G	D	V	V	I	A	E	T	G	T	S	A	F	G	.	I	N	Q	T	T	F	P	N	N	T	Y	G	I	S	Q	V	L	W	G	S	I	G	F	T	T	G	A	T	L	G	A	A	F	A	A	E	E	I	D	P	K	K	R	V	I
Template Known Secondary structure				S	B											T	T	T			T	T							T	T						.	G	G	G					S	S							T	T	T			T	T																		T	T
Template Predicted Secondary structure																																				.
Template SS confidence
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.		.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
		429	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.				.	.	.	.	500	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.
Query SS confidence																																																																					.	.	.
Query Sequence		A	M	C	G	D	G	G	F	S	M	L	M	G	D	F	L	S	V	V	Q	M	K	L	P	V	K	I	V	V	F	N	N	S	V	L	G	F	V	A	M	E	M	K	A	G	G	Y	L	T	D	G	T	E	L	H	D	T	N	F	A	R	I	A	E	A	C	G	.	.	.	I	T	G	I	R	V	E	K	A	S
Query Conservation																																																																					.	.	.
Alig confidence																																												.	.	.																							.	.	.
Template Conservation																																												.	.	.
Template Sequence		L	F	I	G	D	G	S	L	Q	L	T	V	Q	E	I	S	T	M	I	R	W	G	L	K	P	Y	L	F	V	L	N	N	D	G	Y	T	I	E	K	L	I	H	.	.	.	G	P	K	A	Q	Y	N	E	I	Q	G	W	D	H	L	S	L	L	P	T	F	G	A	K	D	Y	E	T	H	R	V	A	T	T	G
Template Known Secondary structure													G	G	G							T	T										S	S	S						T	T	S	.	.	.		T	T		G	G	G							G	G	G					T	T		S	S								B
Template Predicted Secondary structure																																												.	.	.
Template SS confidence
		440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.				.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.
		506	.	.	.	510	.	.	.	.	.			.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		E	V	D	E	A	L	Q	R	A	F	.	.	S	I	D	G	P	V	L	V	D	V	V	V	A	K	E	E	L	A	I	P	P	Q	I	K
Query Conservation												.	.
Alig confidence												.	.																	.	.
Template Conservation																														.	.
Template Sequence		E	W	D	K	L	T	Q	D	K	S	F	N	D	N	S	K	I	R	M	I	E	I	M	L	P	V	F	D	.	.	A	P	Q	N	L	V
Template Known Secondary structure								T		T	T	T	T	S		S	S										T	T		.	.
Template Predicted Secondary structure																														.	.
Template SS confidence
		517	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.			.	.	.	.	.	550

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions