Return to main results Retrieve Phyre Job Id

Job DescriptionP07003
Confidence95.12%DateThu Jan 5 10:59:55 GMT 2012
Rank125Aligned Residues146
% Identity19%Templated1ik6a1
SCOP infoThiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Branched-chain alpha-keto acid dehydrogenase Pyr module
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20 .........30.........40.........50.........60.........70........
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Query Sequence  MKQTVAAYIAKTLESAGVKR. . IWGVTGDSLNGLSDSLNRMGTIEWMSTRHEEVAAFAAGAEAQLSGELAVCAGSCGPGN
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Template Sequence  MMANMAKAINMALHEEMERDERVVVLGELVTEGLYERFGPERVIDT. . PLNEGGILGFAMGMAMAGLKP. VAEIQFVLGA
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   6...10.........20.........30.........40.........50. ........60.........70.. .......80..
 
   7980.........90.........100.........110.........120.... .....130.........140.........150.......
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Query Sequence  LHLINGLFDCHRNHVPVLAIAAHIPSSEIGSGYFQETHPQELFREC. SHYCELVSSPEQIPQVLAIAMRKAVLNRGVSVV
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Template Sequence  DELLNHIAK. LRYKAPLVVRTPVGSPE. . . . . . . . . . . . . AIFVHTPGLVVVMPSTPYNAKGLLKAAIR. . . . GDDPVVF
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   96...100.... .....110.........120. ........130.........140.........150 .......
 
   158.160.......
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Query Sequence  VLPGDVALKP
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Template Sequence  LEPKILYRAP
Template Known Secondary structure  GGGSS

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   175....180....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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