Job Description P07003 Confidence 95.12% Date Thu Jan 5 10:59:55 GMT 2012 Rank 125 Aligned Residues 146 % Identity 19% Template d1ik6a1 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Branched-chain alpha-keto acid dehydrogenase Pyr module Resolution 2.00

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20			.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.
Query SS confidence																						.	.
Query Sequence		M	K	Q	T	V	A	A	Y	I	A	K	T	L	E	S	A	G	V	K	R	.	.	I	W	G	V	T	G	D	S	L	N	G	L	S	D	S	L	N	R	M	G	T	I	E	W	M	S	T	R	H	E	E	V	A	A	F	A	A	G	A	E	A	Q	L	S	G	E	L	A	V	C	A	G	S	C	G	P	G	N
Query Conservation																						.	.
Alig confidence																						.	.																									.	.																						.
Template Conservation																																																.	.																						.
Template Sequence		M	M	A	N	M	A	K	A	I	N	M	A	L	H	E	E	M	E	R	D	E	R	V	V	V	L	G	E	L	V	T	E	G	L	Y	E	R	F	G	P	E	R	V	I	D	T	.	.	P	L	N	E	G	G	I	L	G	F	A	M	G	M	A	M	A	G	L	K	P	.	V	A	E	I	Q	F	V	L	G	A
Template Known Secondary structure																						T	T								T	T	T	T							T	T	T					.	.		S															T	T				.
Template Predicted Secondary structure																																																.	.																						.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		L	H	L	I	N	G	L	F	D	C	H	R	N	H	V	P	V	L	A	I	A	A	H	I	P	S	S	E	I	G	S	G	Y	F	Q	E	T	H	P	Q	E	L	F	R	E	C	.	S	H	Y	C	E	L	V	S	S	P	E	Q	I	P	Q	V	L	A	I	A	M	R	K	A	V	L	N	R	G	V	S	V	V
Query Conservation																																																.
Alig confidence											.																		.	.	.	.	.	.	.	.	.	.	.	.	.							.																							.	.	.	.
Template Conservation											.																		.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.
Template Sequence		D	E	L	L	N	H	I	A	K	.	L	R	Y	K	A	P	L	V	V	R	T	P	V	G	S	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	F	V	H	T	P	G	L	V	V	V	M	P	S	T	P	Y	N	A	K	G	L	L	K	A	A	I	R	.	.	.	.	G	D	D	P	V	V	F
Template Known Secondary structure											.																		.	.	.	.	.	.	.	.	.	.	.	.	.					T		T	T								S														.	.	.	.	S	S	S
Template Predicted Secondary structure											.																		.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.														.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150					.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	P	G	D	V	A	L	K	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	P	K	I	L	Y	R	A	P
Template Known Secondary structure					G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions