Job Description P07003 Confidence 99.28% Date Thu Jan 5 10:59:55 GMT 2012 Rank 72 Aligned Residues 116 % Identity 18% Template c3m7iA_ PDB info PDB header:transferase Chain: A: PDB Molecule:transketolase; PDBTitle: crystal structure of transketolase in complex with thiamine2 diphosphate, ribose-5-phosphate(pyranose form) and3 magnesium ion Resolution 1.75 Å

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		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.												.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.			.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.																			.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.																			.	.
Query Sequence		N	H	G	S	M	A	N	A	M	P	Q	A	L	G	A	Q	A	T	E	P	.	.	.	.	.	.	.	.	.	.	.	E	R	Q	V	V	A	M	C	G	D	G	G	F	S	M	L	M	G	.	.	D	F	L	S	V	V	Q	M	K	L	P	V	K	I	V	V	F	N	N	S	V	L	G	F	V	A	M	E	M
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.																			.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.																			.	.																									.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		A	T	G	P	L	G	Q	G	V	A	N	A	V	G	F	A	X	A	A	K	K	A	Q	N	L	L	G	S	D	L	I	D	H	K	I	Y	C	L	C	G	D	G	D	L	Q	E	G	I	S	Y	E	A	C	S	L	A	G	L	H	K	L	D	N	F	I	L	I	Y	D	S	N	N	I	S	I	.	.	.	.	.
Template Known Secondary structure					S	T	T																						T	T	T																S													T	T		T	T									S			T	.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		471	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.			.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.
Query SS confidence																																		.	.
Query Sequence		K	A	G	G	Y	L	T	D	G	T	E	L	H	D	T	N	F	A	R	I	A	E	A	C	G	I	T	G	I	R	V	E	.	.	K	A	S	E	V	D	E	A	L	Q	R	A	F	S	I	D	G	P	V	L	V	D	V	V	V	A	K
Query Conservation																																		.	.
Alig confidence		.	.	.	.	.																												.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	E	G	D	V	G	L	A	F	N	E	N	V	K	X	R	F	E	A	Q	G	F	E	V	L	S	I	N	G	H	D	Y	E	E	I	N	K	A	L	E	Q	A	K	K	S	T	K	P	C	L	I	I	A	K	T	T	I
Template Known Secondary structure		.	.	.	.	.	T			G	G	G	T												T	T								T	T														T		S	S										T
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions