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Job DescriptionP07003
Confidence100.00%DateThu Jan 5 10:59:55 GMT 2012
Rank23Aligned Residues491
% Identity17%Templatec3lq1A_
PDB info PDB header:transferaseChain: A: PDB Molecule:2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- PDBTitle: crystal structure of 2-succinyl-6-hydroxy-2,4-cyclohexadiene2 1-carboxylic acid synthase/2-oxoglutarate decarboxylase3 from listeria monocytogenes str. 4b f2365
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  QTVAAYIAKTLESAGVKRIWGVTGDSLNGLSDSLNRMGTIEWMSTRHEEVAAFAAGAEAQLSGELAVCAGSCGPGNLHLI
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Template Sequence  TDYLAAFIEELVQAGVKEAIISPGSRSTPLALMMAEHPILKIYVDVDERSAGFFALGLAKASKRPVVLLCTSGTAAANYF
Template Known Secondary structure  TT




TTT
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   910.........20.........30.........40.........50.........60.........70.........80........
 
   83......90.........100.........110.........120.........130.........140.. .......150.. ..
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Query Sequence  NGLFDCHRNHVPVLAIAAHIPSSEIGSGYFQETHPQELFRECSHYCELVSSPEQIPQVLA. . . . . . . IAMRKAVLNR. GV
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Template Sequence  PAVAEANLSQIPLIVLTADRPHELRNVGAPQAMDQLHLYGSHVKDFTDMALPENSEEMLRYAKWHGSRAVDIAMKTPRGP
Template Known Secondary structure  TT



GGGTTSS
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   8990.........100.........110.........120.........130.........140.........150.........160........
 
   155....160.........170.........180.........190.........200.........210.........220.........230....
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Query Sequence  SVVVLPGDVALKPAPEGATMHWYHAPQPVVTPEEEELRKLAQLLRYSSNIALMCGSGCAGAHKELVEFAGKIKAPIVHAL
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Template Sequence  VHLNFPLREPLVPILEPSPFYYTHE. . . . . VLDDSSIQKMVTECTGKKGVFVVGPIDKKELEQPMVDLAKKLGWPILADP
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   169170.........180.........190... ......200.........210.........220.........230.........240...
 
   235....240.........250.........260.........270.........280. ........290.........300........
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Query Sequence  . RGKEHVEYDNPYDVGMTGLIGFSSGFHTMMNADTLVLLGTQFPYRAF. . . . . YPTDAKIIQIDINPASIGAHSKVDMAL
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Template Sequence  LSGLRSYGALDEVVIDQYDAFLKEAEIIDKLTPEVVIRFGSMPVSKPLKNWLEQLSDIRFYVVDPGAAWKDPIKAVTDMI
Template Known Secondary structure  GGSTTSBSS

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   256...260.........270.........280.........290.........300.........310.........320.........330.....
 
   309310.........320.........330.........340.........350.........360.........370.........380.... ...
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Query Sequence  VGDIKSTLRALLPLVEEKADRKFLDKALEDYRDARKGLDDLAKPSEKAIHPQYLAQQISHFAADDAIFTCDVGTPT. VWA
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Template Sequence  HCDERFLLDIMQQNMPDDAKDAAWLNGWTSYNKVAREIVL. . . . AEMANEEGKIVAELRRLLPDKAGLFIGNSMPIRDVD
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   336...340.........350.........360.........370..... ....380.........390.........400.........410.
 
   388.390.........400.........410.........420.........430.........440.........450.........460.......
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Query Sequence  ARYLKMNGKRRLLGSFNHGSMANAMPQALGAQATEPERQVVAMCGDGGFSMLMGDFLSVVQMKLPVKIVVFNNSVLGFVA
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Template Sequence  TYFSQIDKKIKMLANRGANGIDGVVSSALGASV. . VFQPMFLLIGDLSFYHDMNGLLMAKKYKMNLTIVIVNNDEL. . . .
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SSSTT..TSSSTGGGGTT






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   416...420.........430.........440........ .450.........460.........470.........480.........
 
   468.470.........480.........490.........500.........510.........520......
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Query Sequence  MEMKAGGYLTDGTELHDTNFARIAEACGITGIRVEKASEVDEALQRAFSIDGPVLVDVV
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Template Sequence  . . . . . . . . . . . . . . . . . . DFRFAAAFYDADYHEAKSVDELEEAIDKASYHKGLDIIEVK
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TTT


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   515....520.........530.........540.........550.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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