Job Description P07003 Confidence 65.58% Date Thu Jan 5 10:59:55 GMT 2012 Rank 139 Aligned Residues 66 % Identity 24% Template c2v3cC_ PDB info PDB header:signaling protein Chain: C: PDB Molecule:signal recognition 54 kda protein; PDBTitle: crystal structure of the srp54-srp19-7s.s srp rna complex2 of m. jannaschii Resolution 2.50 Å

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		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		L	A	Q	L	L	R	Y	S	S	N	I	A	L	M	C	G	.	S	G	C	A	G	A	H	K	E	L	V	E	F	A	G	K	I	K	A	P	I	V	H	A	L	R	G	K	E	H	V	E	Y	D	N	P	Y	D	V	G	M	T	G	L	I	G	F	S	S	G	F	H	T	M	M	N	A	D	T	L	V	L
Query Conservation																		.
Alig confidence																		.																									.	.	.	.	.											.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.											.	.	.	.	.	.	.
Template Sequence		A	R	Y	I	Q	K	R	G	L	K	P	A	L	I	A	A	D	T	Y	R	P	A	A	Y	E	Q	L	K	Q	L	A	E	K	I	H	V	P	I	Y	G	D	.	.	.	.	.	E	T	R	T	K	S	P	V	D	I	.	.	.	.	.	.	.	V	K	E	G	M	E	K	F	K	K	A	D	V	L	I	I
Template Known Secondary structure																		S				T	T	G	G	G	S	S							S	S							.	.	.	.	.	S	S	S			S	S	S	T	T	.	.	.	.	.	.	.							T	T	S	S		S
Template Predicted Secondary structure																																											.	.	.	.	.											.	.	.	.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.						.	.	.	.	.	.	.	.	170	.								.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions