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Job DescriptionP07003
Confidence100.00%DateThu Jan 5 10:59:55 GMT 2012
Rank13Aligned Residues524
% Identity22%Templatec2q27B_
PDB info PDB header:lyaseChain: B: PDB Molecule:oxalyl-coa decarboxylase; PDBTitle: crystal structure of oxalyl-coa decarboxylase from escherichia coli
Resolution2.12 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MKQ. TVAAYIAKTLESAGVKRIWGVTGDSLNGLSDSLNRMGTIEWMSTRHEEVAAFAAGAEAQLSGELAVCAGSCGPGNL
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Template Sequence  LQMTDGMHIIVEALKQNNIDTIYGVVGIPVTDMARHAQAEG. IRYIGFRHEQSAGYAAAASGFLTQKPGICLTVSAPGFL
Template Known Secondary structure 

TT




TTTTT.

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S
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Query Sequence  HLINGLFDCHRNHVPVLAIAAHIPSSE. . IGSGYFQETHPQELFRECSHYCELVSSPEQIPQVLAIAMRKAVLNR. GVSV
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Template Sequence  NGLTALANATVNGFPMIMISGSSDRAIVDLQQGDYEELDQMNAAKPYAKAAFRVNQPQDLGIALARAIRVSVSGRPGGVY
Template Known Secondary structure  T



TTS

TT


GGGSS

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   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   157..160.........170. ........180.........190.........200.........210... ......220.........230.
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Query Sequence  VVLPGDVALKPAPEG. . . ATMHWYHAPQPVVTPEEEELRKLAQLLRYSSNIALMCGSGCA. . GAHKELVEFAGKIKAPIV
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Template Sequence  LDLPANVLAATMEKDEALTTIVKVENPSPALLPCPKSVTSAISLLAKAERPLIILGKGAAYSQADEQLREFIESAQIPFL
Template Known Secondary structure 
TT



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   164.....170.........180.........190.........200.........210.........220.........230.........240...
 
   232.......240.........250.........260.........270.........280. ........290.........300......
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Query Sequence  HALRGKEHVEYDNPYDVGMTGLIGFSSGFHTMMNADTLVLLGTQFPYRAF. . . . . YPTDAKIIQIDINPASIGAHSKVDM
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Template Sequence  PMSMAKGILEDTHPLSAAAAR. . . . . . . SFALANADVVMLVGARLNWLLAHGKKGWAADTQFIQLDIEPQEIDSNRPIAV
Template Known Secondary structure 
GGGTTSS
TT
TTB
GGG.......
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SGGGGGGTTTS
TT
S
GGGTTSSS

S
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   244.....250.........260.... .....270.........280.........290.........300.........310......
 
   307..310.........320..... ....330.........340.........350.........360.........370... ......380.
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Query Sequence  ALVGDIKSTLRALLPLVEE. . . KADRKFLDKALEDYRDARKGLDDLAKPSEKAIHPQYLAQQISHFAADD. . AIFTCDVG
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Template Sequence  PVVGDIASSMQGMLAELKQNTFTTPLVWRDILNIHKQQNAQKMHEKLSTDTQPLNYFNALSAVRDVLRENQDIYLVNEGA
Template Known Secondary structure  S
T







SSB
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   317..320.........330.........340.........350.........360.........370.........380.........390......
 
   382.......390.........400.........410.........420.........430.........440.........450.........460.
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Query Sequence  TPTVWAARYLKMNGKRRLLGSFNHGSMANAMPQALGAQATEPERQVVAMCGDGGFSMLMGDFLSVVQMKLPVKIVVFNNS
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Template Sequence  NTLDNARNIIDMYKPRRRLDCGTWGVMGIGMGYAIGASVT. SGSPVVAIEGDSAFGFSGMEIETICRYNLPVTIVIFNNG
Template Known Secondary structure  S


SSS
STTTT
TT
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   397..400.........410.........420.........430...... ...440.........450.........460.........470.....
 
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Query Sequence  VLGFVAMEMKAG. GYLTDGTELHDTNFARIAEACGITGIRVEKASEVDEALQRAFSIDGPVLVDVVVAKEELA
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Template Sequence  GIYRGDGVDLSGAGAPSPTDLLHHARYDKLMDAFRGVGYNVTTTDELRHALTTGIQSRKPTIINVVIDPAAGT
Template Known Secondary structure  BSS
S



TTSS



TTB

TT

GGGGGGGGT

STS
B
TTS

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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