Return to main results Retrieve Phyre Job Id

Job DescriptionP07003
Confidence100.00%DateThu Jan 5 10:59:55 GMT 2012
Rank5Aligned Residues536
% Identity21%Templatec2pgnA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:cyclohexane-1,2-dione hydrolase (cdh); PDBTitle: the crystal structure of fad and thdp-dependent cyclohexane-1,2-dione2 hydrolase in complex with cyclohexane-1,2-dione
Resolution1.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40. ........50.........60.........70.........80.
Predicted Secondary structure 













.







Query SS confidence 






































.







































Query Sequence  QTVAAYIAKTLESAGVKRIWGVTGDSLNGLSDSLNRMGT. IEWMSTRHEEVAAFAAGAEAQLSGELAVCAGSCGPGNLHL
Query Conservation   
 

 
   
   

  


 

     
  

     .
  
    
  
   
 
 

 

   

  
 


  
 
Alig confidence 






































.







































Template Conservation    

  
   
   

  


 

     
 


      
  
    
  
   
 
 
  

   
   




  
 
Template Sequence  KRGADLIVEALEEYGTEQVVGFIGHTSHFVADAFSKSHLGKRVINPATELGGAWMVNGYNYVKDRSAAVGAWHCVGNLLL
Template Known Secondary structure  TT


SGGGTSTTSTT
B

SSTS

GGGGGG
Template Predicted Secondary structure 























Template SS confidence 















































































   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   82.......90.........100.........110.........120.........130.........140.........150.. .......160
Predicted Secondary structure 























.


Query SS confidence 






































































.







Query Sequence  INGLFDCHRNHVPVLAIAAHIPSSEIGSGYFQETHPQELFRECSHYCELVSSPEQIPQVLAIAMRKAVLNR. GVSVVVLP
Query Conservation     
  
     


 
 
            
  
   
     
          
   
  
   
    .


 
 

Alig confidence 






































































.







Template Conservation 
 

  
     


 
 
            
            
    
         
  
   
     


 
 

Template Sequence  HAAMQEARTGRIPAVHIGLNSDGRLAGRSEAAQQVPWQSFTPIARSTQRVERLDKVGEAIHEAFRVAEGHPAGPAYVDIP
Template Known Secondary structure  TT

S
GGGTT
TT
SS


GGGGTTTSS

SGGGTSSS

Template Predicted Secondary structure 




























Template SS confidence 















































































   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   161........170.... .....180.........190.........200.........210... ......220.........230.......
Predicted Secondary structure 









.



















..









Query SS confidence 













.






































. .























Query Sequence  GDVALKPAPEGATM. HWYHAPQPVVTPEEEELRKLAQLLRYSSNIALMCGSGCA. . GAHKELVEFAGKIKAPIVHALRGK
Query Conservation   

           .                       
  






 
 
  .. 
   
  


    

  
    
Alig confidence 













.






































..























Template Conservation   
                             
      
  






 
 
     
   
  


    

  
   
Template Sequence  FDLTADQIDDKALVPRGATRAKSVLHAPNEDVREAAAQLVAAKNPVILAGGGVARSGGSEALLKLAEMVGVPVVTTSTGA
Template Known Secondary structure  T

TTTS














SS
T
T


TTTT
Template Predicted Secondary structure 








































Template SS confidence 















































































   164.....170.........180.........190.........200.........210.........220.........230.........240...
 
   238.240.........250.........260.........270.........280. ........290.........300.........310...
Predicted Secondary structure 






























....
















Query SS confidence 











































. . . .































Query Sequence  EHVEYDNPYDVGMTGLIGFSSGFHTMMNADTLVLLGTQFPYRAF. . . . YPTDAKIIQIDINPASIGAHSKVDMALVGDIK
Query Conservation 
     

   
  
          
   
 

 

        ....       
 

 
                
  
Alig confidence 











































....































Template Conservation 
      
   
  
      
   
   
 

 

  
                
 
  
             
  
  
Template Sequence  GVFPETHALAMGSAGFCGWKSANDMMAAADFVLVLGSRLSDWGIAQGYITKMPKFVHVDTDPAVLGTFYFPLLSVVADAK
Template Known Secondary structure  TSS
TTSTT
STTS

SS



TTTTTTTTT



SS
GGGTTSSS

S

Template Predicted Secondary structure 


















































Template SS confidence 















































































   244.....250.........260.........270.........280.........290.........300.........310.........320...
 
   314.....320...... ...330.........340.........350.........360.........370.........380.....
Predicted Secondary structure 


........



















Query SS confidence 












. . . . . . . .


























































Query Sequence  STLRALLPLVEEK. . . . . . . . ADRKFLDKALEDYRDARKGLDDLAKPSEKAIHPQYLAQQISHFAADDAIFTCDVGTPTV
Query Conservation    
  
       ........                                       
   
    
   
 
    
Alig confidence 












........


























































Template Conservation    
  
   
                                                  
        

  
 
    
Template Sequence  TFMEQLIEVLPGTSGFKAVRYQERENFRQATEFRAAWDGWVREQESGDGMPASMFRAMAEVRKVQRPEDIIVTDIGNHTL
Template Known Secondary structure  GGGSTT




GGGSTTT



SS

T

TT

SSTT
Template Predicted Secondary structure 

































Template SS confidence 















































































   324.....330.........340.........350.........360.........370.........380.........390.........400...
 
   386...390.........400.........410.........420.........430.........440.........450.........460.....
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  WAARYLKMNGKRRLLGSFNHGSMANAMPQALGAQATEPERQVVAMCGDGGFSMLMGDFLSVVQMKLPVKIVVFNNSVLGF
Query Conservation            
           

     



 

 
   

 
 




     

 

      
 


 

   
 
Alig confidence 















































































Template Conservation                      
 

  
  






 
   

 
 




     

 

    
 
 


 

 
 
 
Template Sequence  PMFGGAILQRPRRLVTSMAEGILGCGFPMALGAQLAEPNSRVFLGTGDGALYYHFNEFRVAVEHKLPVITMVFTNESYGA
Template Known Secondary structure 


SSTT
S
TTT

TT

TTS
GGGTT



SB
Template Predicted Secondary structure 





























Template SS confidence 















































































   404.....410.........420.........430.........440.........450.........460.........470.........480...
 
   466...470.........480.........490.........500.........510.........520.........530........
Predicted Secondary structure 





































Query SS confidence 








































































Query Sequence  VAMEMKAGGYLTDGTELHDTNFARIAEACGITGIRVEKASEVDEALQRAFSIDGPVLVDVVVAKEELAIPPQI
Query Conservation                      
   

 
 
     
    

  

  
    

 



 

      
   
Alig confidence 








































































Template Conservation                      
   

 
 
     
    

  

  

    
 



 

          
Template Sequence  NWTLMNHQFGQNNWTEFMNPDWVGIAKAFGAYGESVRETGDIAGALQRAIDSGKPALIEIPVSKTQGLASDPV
Template Known Secondary structure  SS

S
B




T

TTT


S


SSSSTTT

S
Template Predicted Secondary structure 

































Template SS confidence 








































































   484.....490.........500.........510.........520.........530.........540.........550......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions