Job Description P07003 Confidence 59.81% Date Thu Jan 5 10:59:55 GMT 2012 Rank 143 Aligned Residues 70 % Identity 17% Template c2j289_ PDB info PDB header:ribosome Chain: 9: PDB Molecule:signal recognition particle 54; PDBTitle: model of e. coli srp bound to 70s rncs Resolution 8.0 Å

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		191	.	.	.	.	.	.	.	.			200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure											.	.															.
Query SS confidence											.	.															.
Query Sequence		L	R	K	L	A	Q	L	L	R	.	.	Y	S	S	N	I	A	L	M	C	G	S	G	C	A	.	G	A	H	K	E	L	V	E	F	A	G	K	I	K	A	P	I	V	H	A	L	R	G	K	E	H	V	E	Y	D	N	P	Y	D	V	G	M	T	G	L	I	G	F	S	S	G	F	H	T	M	M	N	A	D
Query Conservation											.	.															.
Alig confidence											.	.															.																			.	.	.	.	.	.												.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.												.	.	.	.	.
Template Sequence		V	G	K	L	G	K	F	L	R	E	K	H	K	K	K	V	L	V	V	S	A	D	V	Y	R	P	A	A	I	K	Q	L	E	T	L	A	E	Q	V	G	V	D	F	F	.	.	.	.	.	.	P	S	D	V	G	Q	K	P	V	D	I	.	.	.	.	.	V	N	A	A	L	K	E	A	K	L	K	F	Y	D
Template Known Secondary structure											T	S	S	S					B						S	S	S		S											T	T					.	.	.	.	.	.			S	S				T	T			.	.	.	.	.											T	T		S
Template Predicted Secondary structure																																														.	.	.	.	.	.												.	.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160							.	.	.	.	.	.	.	.	.	170	.						.	.	.	.	.	.	.	.	180	.	.	.	.	.
		268	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	L	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions