|   |
188 | . | 190 | . | . | . | . | . | . | . | . | . | 200 | |
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 210 | . | . | . | |
. | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |
|
|
|  |  |  |  |  |
|
|
|
|  | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | E | E | L | R | K | L | A | Q | L | L | R | Y | . |
. |
. |
. |
. |
. |
S | S | N | I | A | L | M | C | G | S | G | C | A | . |
G | A | H | K | E | L | V | E | F | A | G | K | I | K | A | P | I | V | H | A | L | R | G | K | E | H | V | E | Y | D | N | P | Y | D | V | G | M | T | G | L | I | G | F | S | S | G | F |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   | . | . | . | . | . | . |
|
|
|
|
|
|
|   |
|   |
|   |   | . |   |
|   |   |   |
|   |   |
|
|
|   |   |   |   |
|
|   |   |
|   |   |   |   |
|   |   |   |   |   |
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |   |
|
|   |
|
|   |   |
|   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |   |   |   |
|   |   |   | . | . | . | . |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
Template Sequence |   |
D | Q | A | L | D | E | I | A | E | K | L | K | K | I | I | A | K | Y | G | P | E | S | L | G | V | S | Q | T | E | I | N | Q | Q | S | E | Y | G | T | L | R | R | F | M | N | L | L | G | S | P | N | W | T | S | A | M | Y | M | C | I | G | N | . |
. |
. |
. |
T | A | G | V | H | R | V | T | H | G | S | Y | S | F | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| G | G | G |  |  |  |  |  |
| G | G | G | T |
|
|
| T | T |  |  |  |  |  |  |  |  |  | T |
|
|
|  |  |
| G | G | G | G | T | T |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  | S | S |
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | |
|
|
|
. | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . |
  |
  |   |
261 | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | |
|
. | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | |
. | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
| . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
Query Sequence |   |
H | T | M | M | N | A | D | T | L | V | L | L | G | T | Q | F | P | Y | R | A | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Y | P | T | D | A | K | I | I | Q | I | D | I | N | P | A | S | I | G | A | H | S | K | V | D | M | A | L | V | G | . |
. |
D | I | K | S | T | L | R | A | L | L | P | L | V | E | E | . |
K | A |
Query Conservation |   |
  |   |
|   |   |   |
|   |
|
|   |
|
|   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   | . |   |   |
Alig confidence |   |
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
Template Conservation |   |
| . |   |   |   |
|
|   |
|
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|
|
|
|
|
|
|   |
|   |
|
|   |   |
|
|   |   |
|   |
|   |
|
|
|
|   |
|
|   |
|
|
|   |   |   |
|
|   |   |   |   |   |
Template Sequence |   |
S | . |
F | A | D | S | N | C | L | L | F | I | G | K | N | L | S | N | H | N | W | V | S | Q | F | N | D | L | K | A | A | L | K | R | G | C | K | L | I | V | L | D | P | R | R | T | K | V | A | E | M | A | D | I | W | L | P | L | R | Y | G | T | D | A | A | L | F | L | G | M | I | N | V | I | I | N | E | Q | L | Y |
Template Known Secondary structure |   |
| . | T | T | T |
| S |  |  |  |  |  | S |
|
|
| B | T | T | B | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |
| S | S |
|
|  |  |  |  |  |
| S |  |  |  |
|
|
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |
Template Predicted Secondary structure |   |
 | . |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
160 | |
. | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . |
  |
  |   |
328 | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | R | K | F | L | D | K | A | L | E | D | Y | R | D | A | R | K | G | L | D | D | L | A | K |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |   |   |
|   |
|
|   |   |
|   |   |   |
|   |   |   |
|   |
Template Sequence |   |
D | K | E | F | V | E | N | W | C | V | G | F | E | E | L | K | E | R | V | Q | E | Y | P | L |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  | T | T |
|
|  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
239 | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . |
  |