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Job DescriptionP07003
Confidence100.00%DateThu Jan 5 10:59:55 GMT 2012
Rank10Aligned Residues532
% Identity22%Templatec2ag1A_
PDB info PDB header:lyaseChain: A: PDB Molecule:benzaldehyde lyase; PDBTitle: crystal structure of benzaldehyde lyase (bal)- semet
Resolution2.58 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  KQTVAAYIAKTLESAGVKRIWGVTGDSLNGLSDSLNRMGTIEWMSTRHEEVAAFAAGAEAQLSGELAVCAGSCGPGNLHL
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Template Sequence  XITGGELVVRTLIKAGVEHLFGLHGAHIDTIFQACLDHD. VPIIDTRHEAAAGHAAEGYARAGAKLGVALVTAGGGFTNA
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T





GGGT.


SSTS

TTT
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   3......10.........20.........30.........40. ........50.........60.........70.........80.
 
   82.......90.........100.........110.... .....120.........130.........140.........150.. .......
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Query Sequence  INGLFDCHRNHVPVLAIAAHIPSSEIGSGYFQE. THPQELFRECSHYCELVSSPEQIPQVLAIAMRKAVLNR. GVSVVVL
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Template Sequence  VTPIANAWLDRTPVLFLTGSGALRDDETNTLQAGIDQVAXAAPITKWAHRVXATEHIPRLVXQAIRAALSAPRGPVLLDL
Template Known Secondary structure  T



STTTTS

TT

S
GGG
S


GGGSSS


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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   160.........170.... .....180.........190.........200.........210... ......220.........230......
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Query Sequence  PGDVALKPAPEGATM. HWYHAPQPVVTPEEEELRKLAQLLRYSSNIALMCGSGCA. . GAHKELVEFAGKIKAPIVHALRG
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Template Sequence  PWDILXNQIDEDSVIIPDLVLSAHGARPDPADLDQALALLRKAERPVIVLGSEASRTARKTALSAFVAATGVPVFADYEG
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TTSS







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SS
T




GGG
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   162.......170.........180.........190.........200.........210.........220.........230.........240.
 
   237..240.........250.........260.........270.........280. ........290.........300.........310
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Query Sequence  KEHVEYDNPYDVGMTGLIGFSSGFHTMMNADTLVLLGTQFPYRAF. . . . . . YPTDAKIIQIDINPASIGAHSKVDMALVG
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Template Sequence  LSXLSGLPDAXRGGLVQ. NLYSFAKADAAPDLVLXLGARFGLNTGHGSGQLIPHSAQVIQVDPDACELGRLQGIALGIVA
Template Known Secondary structure  GGGGTTS
GGGGG.GGGGGGGGT


SS

SSGGGTTTS
SSS
TTS
SSGGGTTSSS

S
S
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   242.......250........ .260.........270.........280.........290.........300.........310.........320
 
   311........320..... ....330.........340.........350.........360.........370.........380.......
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Query Sequence  DIKSTLRALLPLVEE. . . KADRKFLDKALEDYRDARKGLDDLAKPSEKAIHPQYLAQQISHFAADDAIFTCDVGTPTVWA
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Template Conservation 
    
  
                                                 
        
   
 
      
Template Sequence  DVGGTIEALAQATAQDAAWPDRGDWCAKVTDLAQERYASIAAKSSSEHALHPFHASQVIAKHVDAGVTVVADGALTYLWL
Template Known Secondary structure 
TT





TT


SSS

TT
STT
ST
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   321........330.........340.........350.........360.........370.........380.........390.........400
 
   388.390.........400.........410.........420. ........430.........440.........450.........460.....
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Query Sequence  ARYLKMNGKRRLLGSFNHGSMANAMPQALGAQAT. . EPERQVVAMCGDGGFSMLMGDFLSVVQMKLPVKIVVFNNSVLGF
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Template Sequence  SEVXSRVKPGGFLCHGYLGSXGVGFGTALGAQVADLEAGRRTILVTGDGSVGYSIGEFDTLVRKQLPLIVIIXNNQSWGA
Template Known Secondary structure  TTS

S


TT

TTTTT
GGGTTTT



SB
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   401........410.........420.........430.........440.........450.........460.........470.........480
 
   466...470....... ..480.........490.........500.........510.........520.........530.......
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Query Sequence  VAMEMKAGGYLT. . DGTELHDTNFARIAEACGITGIRVEKASEVDEALQRAFSIDGPVLVDVVVAKEELAIPPQ
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Template Sequence  TLHFQQLAVGPNRVTGTRLENGSYHGVAAAFGADGYHVDSVESFSAALAQALAHNRPACINVAVALDP. . IPPE
Template Known Secondary structure  T
TT


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B




TTS
SSSS


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   481........490.........500.........510.........520.........530.........540........ .550..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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