Job Description P07003 Confidence 96.86% Date Thu Jan 5 10:59:55 GMT 2012 Rank 107 Aligned Residues 220 % Identity 15% Template c1ik6A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:pyruvate dehydrogenase; PDBTitle: 3d structure of the e1beta subunit of pyruvate2 dehydrogenase from the archeon pyrobaculum aerophilum Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	Q	T	V	A	A	Y	I	A	K	T	L	E	S	A	G	V	K	R	I	W	G	V	T	G	D	S	L	N	G	L	S	D	S	L	N	R	M	G	T	I	E	W	M	S	T	R	H	E	E	V	A	A	F	A	A	G	A	E	A	Q	L	S	G	E	L	A	V	C	A	G	S	C	G	P	G	N	L	H
Query Conservation
Alig confidence																		.	.																											.	.																														.	.
Template Conservation																		.	.																											.	.																														.	.
Template Sequence		M	A	K	A	I	N	M	A	L	H	E	E	M	E	R	D	.	.	E	R	V	V	V	L	G	E	L	V	T	E	G	L	Y	E	R	F	G	P	E	R	V	I	D	T	.	.	P	L	N	E	G	G	I	L	G	F	A	M	G	M	A	M	A	G	L	K	P	V	A	E	I	Q	F	V	L	.	.	G	A	D
Template Known Secondary structure																		.	.	T	T								T	T	T	T							T	T	T					.	.		S															T	T												.	.
Template Predicted Secondary structure																		.	.																											.	.																														.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80			.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		L	I	N	G	L	F	D	C	H	R	N	H	V	P	V	L	A	I	A	A	H	I	P	S	S	E	I	G	S	G	Y	F	Q	E	T	H	P	Q	E	L	F	R	E	C	.	S	H	Y	C	E	L	V	S	S	P	E	Q	I	P	Q	V	L	A	I	A	M	R	K	A	V	L	N	R	G	V	S	V	V	V	L
Query Conservation																																														.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.							.																								.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.
Template Sequence		E	L	L	N	H	I	A	K	L	R	Y	K	A	P	L	V	V	R	T	P	V	G	S	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	F	V	H	T	P	G	L	V	V	V	M	P	S	T	P	Y	N	A	K	G	L	L	K	A	A	I	R	G	.	.	.	.	D	D	P	V	V	F	L	E
Template Known Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.					T		T	T								S														S	.	.	.	.	S	S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.														.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.					.	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		P	G	D	V	A	L	K	P	A	P	E	G	A	T	M	H	W	Y	H	A	P	Q	P	V	V	T	P	E	E	E	E	L	R	K	L	A	Q	L	L	R	Y	S	S	N	I	A	L	M	C	.	G	S	G	C	A	G	A	H	K	E	L	V	E	F	A	G	K	I	K	A	P	I	V	H	A	L	R	G	K	E
Query Conservation																																																			.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.												.															.	.								.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.																											.	.								.	.	.	.	.	.	.
Template Sequence		P	K	I	L	Y	R	A	P	R	E	E	V	P	E	G	D	Y	V	V	E	I	G	K	A	R	V	.	.	.	.	.	.	.	.	.	.	.	.	A	R	E	G	D	D	V	T	L	V	T	Y	G	A	V	V	H	K	A	L	E	A	A	E	R	V	.	.	K	A	S	V	E	V	V	.	.	.	.	.	.	.
Template Known Secondary structure			G	G	G	S	S									S	S					T	T					.	.	.	.	.	.	.	.	.	.	.	.					S	S							T	T											T	S	.	.	S	S						.	.	.	.	.	.	.
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.																											.	.								.	.	.	.	.	.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.													.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.			.	230	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	V	E	Y	D	N	P	Y	D	V	G	M	T	G	L	I	G	F	S	S	G	F	H	T	M	M	N	A	D	T	L	V	L	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	D	L	Q	T	L	N	P	L	D	F	D	T	V	L	K	S	V	S	K	T	G	R	L	I	I	A
Template Known Secondary structure		.	.	.	.	.	.	.	.							T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions