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Job DescriptionP30844
Confidence99.41%DateThu Jan 5 11:46:28 GMT 2012
Rank27Aligned Residues108
% Identity17%Templatec2q2eB_
PDB info PDB header:isomeraseChain: B: PDB Molecule:type 2 dna topoisomerase 6 subunit b; PDBTitle: crystal structure of the topoisomerase vi holoenzyme from2 methanosarcina mazei
Resolution4.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   254.....260.........270. ........280.........290.........300........ .310.........320.....
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Query Sequence  LRMLLRNLVENAHRYSPQ. . . . . GSNIMIKLQEDDGAVMAVEDEGPGIDESKCGELSKAF. . . VRMDSRYGGIGLGLSIV
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Template Sequence  LITTVKEAVDNALDACEEAGILPDILVQVERTGPDYVTVIIEDNGPGIVREQIPKVFAKLLYGFHALKSRGQQGIGISAA
Template Known Secondary structure  TTTS
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   38.40.........50.........60.........70.........80.........90.........100.........110.......
 
   326...330..... ....340.........350.........360.
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Query Sequence  SRITQLHHGQ. FFLQNRQETSGTRAWVRLKKDQYVAN
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Template Sequence  VLYAQMTAGRHTKILSKTSPTAPAHYYELMINTSTNE
Template Known Secondary structure  T




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   121........130.........140.........150.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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