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Job Description | P30844 | Confidence | 99.41% | Date | Thu Jan 5 11:46:28 GMT 2012 |
Rank | 27 | Aligned Residues | 108 |
% Identity | 17% | Template | c2q2eB_ |
PDB info |
PDB header:isomerase | Chain: B: PDB Molecule:type 2 dna topoisomerase 6 subunit b; |
PDBTitle: crystal structure of the topoisomerase vi holoenzyme from2 methanosarcina mazei
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Resolution | 4.00 Å |
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Predicted Secondary structure |   |
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Query Sequence |   |
L | R | M | L | L | R | N | L | V | E | N | A | H | R | Y | S | P | Q | . |
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V | R | M | D | S | R | Y | G | G | I | G | L | G | L | S | I | V |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
L | I | T | T | V | K | E | A | V | D | N | A | L | D | A | C | E | E | A | G | I | L | P | D | I | L | V | Q | V | E | R | T | G | P | D | Y | V | T | V | I | I | E | D | N | G | P | G | I | V | R | E | Q | I | P | K | V | F | A | K | L | L | Y | G | F | H | A | L | K | S | R | G | Q | Q | G | I | G | I | S | A | A |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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38 | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . |
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326 | . | . | . | 330 | . | . | . | . | . | |
. | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
S | R | I | T | Q | L | H | H | G | Q | . |
F | F | L | Q | N | R | Q | E | T | S | G | T | R | A | W | V | R | L | K | K | D | Q | Y | V | A | N |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
V | L | Y | A | Q | M | T | A | G | R | H | T | K | I | L | S | K | T | S | P | T | A | P | A | H | Y | Y | E | L | M | I | N | T | S | T | N | E |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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121 | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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